| Annotation |
|---|
| Description | jgi|Araly1|479750|fgenesh2_kg.3__2451__AT3G22380.1 |
| Sequence |
GGAGGGCCAA GATTTTGTCT TGCTGGTATA TAGTTGATCA TGACCGTTGG ATGAATTCAC ACCGACGGTG AAGATTGAGA AAATGTTTTA CGGCAGGAGA TATGAGCCGT GGATTTATTC GCTACTCTGC TTTTATGAGG AGCACAAATA AAGGAGATAA TGGGAAGCAA GTAGAGAGAT AGAGGAAAGA GAGATAAAGA GAGAGAAAAG GGGTTGCGAT TTTGGGAGAA GAGAAAAGAG GAAGAAGCAT TAGAGAAGAC GATGGATAGA AATAGAGAAG CTAGAAGAGT ACCTATGGCG GCTGCCGGAA ATGGTCTTTC ACGGCGGAGA CATAGAGCCG GAAGTTTCAG AGATTCACCA GAGGAGGAAG GTCCGGTGGA GTTACCGGAG GCGGCGAGGT TGAGAGATCG AGGAGGGAGT AATAAGAAGG ATCGAGATCG GGAACGTGAT AGAGACAGAG AGAGGGAAAG AGAAAGAGAT AGGGAGAGAG ATCGGTTAAA TAGCCGGAGT AAACGGAGAA GAGGAGAACG ATTAATGATG GTTCACGGTA ATTTAGACGA CGGTGGTGAC GATAGCTCTG AAGAGAGTGT TAACGACGAT GAAGAATATG ACGACGGAGG AGCTGTAGGA CCACCGTCTT CGTTGAAGAT GCTTCCTCCG ACGAGTAATA ATATCTCCGC CGCATCGTTT TCATCGTCTC TTTCAAATCA TCACAACGGT GGTAGCGGTA ATCTTCATCA CCATCACAAC CATCATAATA ACCATCAGAG GAAGAATTTT CCGCCGACGA AAGTTTTCAG ATCGTCTCCT TCTCTGGCGC CGGTTTCACC TCTAGTCTCG ACGTGGAAAG CCGCTGACGA AATGATCGGT GTTTCGGTTC CTAGAAAAGC TCGGTCAGCT TGTACGAAGA GACCTCATGA ATCATGGTCA TCAAGTACTA CCGGAGGTGG TGTTTTTGCT TCCGGTGAAC AAATCCACCG CCAAATATCA TCAACGTCTC CAGCTAATAG AGTTAGTCCT GCTTCAATTC TAGCATCTCC GTCTCCTCCA GCTCCTACAT CTCCTTCTTC ATCAAGCATT TCAGTCCGGA AAAAATTGTC GTCGGGAACA AAACAGAAGA CGTTACCGCC GAAATCATCA TCGTGTAAGT TATCATCGTC GGTGGCTGTA CAAGACGAGA TCGAGATCGA GATTGCAGAA GTGTTGTACG GTATGATGAG GATGCCTTTA GCTACCTCAA AACAAGAATC CGCCGGTAAC GATATGACGG AGGCAGCGAA ATCAACAGTA GAAGTCAAAT CTAGAGTATC TTCACCGATC TCAAATCCTC AGACTCTTCC TCAATCCTCC ATCACACTAG CTACAAATTC TAGCTCTTCT AATGTTTCAG CCATTGCTCC TAAAAGAAAG AAGCCAAGAC ATGTCAAATA CGAAGATGAT AACAGTTCTC GCATCACTAC AATCAAATCC GAAGCCGAAG CTCCTTCAAA AAATCAAGTT CCGTTTGGTG ATCAGCTAAA GAGCTCAGGA TCCGGCGAAG GAAACAGCTC TGTATTGGAT TCGATCATTC CACAGACGAG AGAAAGTAAC GCTTCGTTAG ATTCGAGATC AGCTGAGAAA AAAGAGAACA ATCTGTCGAA AGATGAAACG ATATTGCCGA AAGTGGAATC TTCTTCAGGA TTTAGATCCG ATGGTGATGG AGCTAAATTG AGTTCGCCGG AAAAAGCGAA GTTTGAGATA GATCTGATGG CGCCACCGCC GGTGAGATCA TCGTCGGAGA GAGGCGGAGA GATGATGGAA TGTGTGGCAG CAGAAGCTAA ACCTAAAGTC ACGGAAGTGG AAACGGAAGC AAAGCCTCTG CTCAAGGAAG ATAGAGGTGA AGCGGCGATT CATGATTCTC AGGAGAAGAA GAGACCTAGA ACGGTGGTAG AAGCTGAACA CCATAAGTAT GAGAGGAATT GTGAACTTAA ACTCGACTTG GATAAATCTG ATCATGTTGG TTTAGTAAAC AAGCATCATG TTCAGAAACA GCCACCGCAA CAACAACTAT CTGTTCCTGA TAAAACAACT CAAGGTAGCC ATTTGCCTCT GCATATGTCT ATGCCTGGCT GGCCTGGGGG CCTTCCTACA ATGGGATATA TGGCACCTAC GCAAGGAGTT GTGCCTACGG ATGCCAGTTC CTTATCTGCT GCAGCAATGC AGCCTCCACC GCATTTACTT TTTAATCAAC CGAGGCCTAA GCGATGTGCT ACACACTGCT ACATTGCTCG GAATATTCAA TCTCATCAGC AGTTCACAAA GATGAATCCT TTCTGGCCTG CAGCAGCAGG CTCAGCTCCA TTGTATGGGA CCAAGGCCTG CAATCTCAGT CTCATGCCTC CCACAGAACT TCAGGGGAGT GTTTTGGGAA GAAGTTCCAA CCCTGTTCAA GATAAGAATT CTCAATCTAC GTCCAAAAGC TCAGATACAG CTCAGAGAAA TCAATTATTG CTCCAACAAG CTTTGCCTCC AGGAGCTGCT AATAACATCT TGCATGGTCC TACATTCATA TTCCCCTTGG GCCAACAGCC TCATACAGCC GCTACAATAG CTGCTGCATC TGTCAGACCT CCTAATAGTG GCATCACATC TTCTGGACCA ACAGCTACTT CTAACTCCAT GAATGGTTCT GTATCCGCTA CTCCAGCCGG TGCCCCAACA ATGAGCTTCA GTTACCCGGC CATGCCGGGA AATGAAACGC AGTACCTGGC CATTTTACAG AATAACGGCT ATCCATTTCC AGTTCCAGCA CATGTTGGGG CACCACCTGC TTATAGAGGA GCTCCTGGGC AGCCGATGCC ATTTTTTAAT GGTTCATTCT ATTCCTCCCA AATGATCCAG CCTCCACATC ATCAGCCACA GAAGCAGCAA CAGCAGCAGC AAACTGGTCA AATGCTGCAG AGCCATGCTC CTAACAACCA GAATGGGAGT GTTTCCACTG GTTCCTCAGC AGCACAAAAG CATCTGCAGA ACCAACAGTT GAGGCCACCG ATTAATCATG GGAACTCCCA AGGATTTCCA ACTCATAAAG TCCAGTCTCA GCCTTTGAGT TTTCAGCAGA GGCAGCAACC CAGAGAAAAT GCAACTCAAC ATAGTGAGAC TGTAGGGGAA GATAGCCCAT CAACTGCTGA TAGCCGGGGT TCTCGTTCCA ATGTTGCCTA TGGCCAGAAC TATGGTATGC AAATGCAACC AACCAACTTG GGTTTGATGA GTTCACCAGC CCCTGGTGGT GGAGTGGTTG GATCTTCGAG CAGTCATGGT GAAAAGAAAC CACAGCAGCA GGTTTCAAAG GCTGGGGCAG AATCCTTCCA GTCACAGGGT TATGCTATGA CTTTTGCGAC ATTCAATGGG GCTAACACTG CTCCTGCCCT AAACATGTCA TCAATTGCTC AGAATCACGC TATGTTCCAC AGCATGCCCG AAGCAGCGAG GCAAGGTTAT CAGATGATGG CAGTTGCTCA AGCAGCTCAA CAAAAAATGA ACTACAGTGC TTCACATGAA GATGGAAAAT CCGGGTCTAT TGGTGCTGCT ACTGCTAACA CCCCAGAGGA ACAAAGGAAG TCAGGAGGAG GAACAACAGG GAAAACGAGT GGTGGGAATG GTGGGCAGTC TATTGCTTTC TCTAACAAAC ACGATTTAGC TGATGCATCT GTTTCTGCTG TCACGAGTGG TAGCATCGTT GATAGCTCAT CCCGTTTGCT CAACCTTGGT TCTGCTCTGC CACAGAGTTC GGGTTCTATG CCCCCGTCTC ATCATCATCA GCAACTACTA CAGCAACAGC AGCAGCAACA GCAGCAGCAT ATGCAACGGA GTCAATCACA GCAACCTTAT ACCACCATGT ATCTCCAGAA GCAGCAACGG TATGCAACTT CAGTGGCTGC TTCTGCTGCT AGAACCAAAG GGCCCGTGGC GAGTAACGGG AGTGGTTTCC CTGATCACAA TATCATCACA TCACCTGCGG CAACCACCAA GTTTGCAAAT GCTAATGCTG GGTTCCCTCA AAACCTTGTC CAGTCGAGCA GCAATCAGGT TCAGTCTCCT CAGTGGAAAA ACAATTCACC CAGGACAACA AATACTACCC AAGCTCAGTC TCCTTCGATA CTATCGCCAT CATCATCAGT TGCTGCTGCA TCGTCGCTAA GAAATGTCTC GCATAAACAG CAAAGCCGTC CCCAGCAATC GCAGATATCT TTTGCAGCAA ACTCGAAACC AATGGCTTCT GGTTCACCAA TGCAGCAGGT GCAAGGAGGA ACCAACCACC AGGCTCCGTC TCCACCAATG TTAGTTGGGT CGCCTTCGAC GTCTTCCGTC TCCAAAAACG CCAGCGGAAG CCCAAGAACA ACTGCTTCCG CTTCCTCGGC AGCTAACAAG GCTGGACAAG CTTCCTCTAC TACTCACTCA TCATCTCAGC CGTCCAAGAA CTTACAGTCT GCATCTGTGG CGTCATCTGC TGGTGGAAGG AACAATGGTC CTTCTGTTCT CGGAAACCCG ACCACGAGCT CTGGATCCAA GTCCCAACAA CAGCATCAGT TGCCAAAGCA TGGGATGCAG CCGCAAGCAC AGCTTTTCTT CTCTAATCCT TACATGCAAG CTCAACATCA ACATCAACAG CAACAGATCA CTATATCTCC TTCTGGTGGG TATTACATCC AAAGACATCA GCAACAGTCA GGTTCAGCAC CTGCTGCTGT AGCCACATGT CCTCCAGTCA CGGGAGCCGT CAGCGCCACT TCAGATCCAG CGAAAGCCAT AGCGGCAGCA GCAGCAGCAA ATAACATGAA AGGAGGAAGT GGTATGGGTA AAACTCAACA ACATCAACTT GGGCCTCCAG GGTTCACGAA TGTTCACGCG GTTCCCTCTG CGGTTCAGGT TAAACCTGTG GATCAGAAGC AACAAGCGGG TGAGTGAAAG ATCCTTAAAA CCAATTTGTT TTAGCTTAAA AGAGACTCTC TGAATGGTTG GGAAGTTCCG GTTATAGCTT GTGCTGGCGA GACGAAAGGA CTTTAAAGAG TCTGATGAAG AAAAGATGCA GACGGAACAG AACACCTTTA AAAAGGGATG ACAATTTTTT TGGAGTTGGG GGTGCTTTTA AAAGCATTGT GTACAATTTA GTGTTTATAT ATTCTGACAG GAGCCTACGG TTTCAATTCC AAAACCCAAA AAAAAAGAAA AAAGGAAGAA GCAAAATTTA AAAATTTTAT TCATTCTTCT TGGGGAGGTT TGAGTTGTTT TGGTGGTGAT GATGTTATTA GGTAGGAATC CAAAAGAAAA TGGGAGAAGT AAAGAGTCGT AAGGCACAGC AAGAGCCAAC GAATGTACGT TCATAAGTTG GCCCAGTATG ATGAATTTAT GATTCGTTCT ATTTTGTGTT TATGTTTT |
| Length | 5418 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 9398338.. 9404874 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G22380.2 |
| Description | time for coffee |
| TAIR curator summary | Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. |
| Alias | [TIC][TIME FOR COFFEE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg484493 | DCD (Development and Cell Death) domain protein |
| 13.2665 |
Ahg929176 | RELA/SPOT homolog 2 |
| 13.9284 |
Ahg491400 | gamma vacuolar processing enzyme |
| 14.4222 |
Ahg896860 | glycine-rich protein |
| 16.4317 |
Ahg323999 | Structural maintenance of chromosomes (SMC) family protein |
| 17.2047 |
Ahg482337 | Dormancy/auxin associated family protein |
| 17.8885 |
Ahg486623 | brassinosteroid-responsive RING-H2 |
| 18 |
Ahg478924 | Class I glutamine amidotransferase-like superfamily protein |
| 21.0713 |
Ahg490342 | sucrose synthase 3 |
| 22.0227 |
Ahg473413 | WWE protein-protein interaction domain protein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|