Detail



ID : Ahg479804

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479804|fgenesh2_kg.3__2505__AT3G22960.1
Sequence
AACACTCTCA CACTTCGATA TCTCCGCCTT CTTCTCCTCT GAGCCAACTG TCCTTCGATT TCGATTTCGA TTTCTCCGAT CTCTCTCCCT CCGGCACCGG CGAAACTATG TCTCAGTCTA TCCAATTCTC CACTCCTTCA CGCACTCCTC ACCTTCTCAA TCTCCCTCAC TCACAATTCA ACCGTCCTCT CTCCTCTATC TCCTTCCGTC GTTTCCCTCT AACAACCATC AAATACACTT CCATCAGAGC CTCCTCTTCG TCTCCGTCGC CTTCACCGGA TCTCGATTCA TCATCATCCT CGTCGTCGTC GCAGGTACTT CTCTCACCTA ACGGTACTGG TGCTGTGAAG TCTGATGAGA GATCCGTTGT AGCTACGGCT GTTACGACGG ATACGGCTGG GATTGAGGTT GATACGGTGA CGGAAGCGGA GCTTAAGGAG AATGGATTTA GAAGTACGAG AAGGACGAAG CTGATTTGTA CGATCGGACC GGCTACGTGT GGATTTGAGC AGCTTGAGGC GCTTGCTGTG GGAGGTATGA ACGTGGCGCG GCTTAATATG TGTCACGGTA CTCGCGATTG GCACCGCGGT GTGATTCGTA GTGTTCGTAG GCTTAATGAG GAGAAAGGCT TTGCGGTTGC TATTATGATG GATACTGAAG GTAGTGAGAT TCATATGGGA GATCTTGGTG GTGAAGCTTC AGCTAAAGCA GAGGATGGTG AGATTTGGAC TTTCACTGTT AGAGCTTTTG ATTCTTCTCG TCCTGAACGT ACCATTAGTG TGAGCTACGA TGGTTTCGCT GAAGATGTAA GAGTTGGGGA TGAACTTCTA GTTGATGGTG GAATGGTGAG ATTTGAAGTG ATTGAGAAGA TTGGTCCTGA TGTTAAGTGT CTATGTACCG ATCCCGGATT GTTGCTTCCT CGAGCTAACT TGACGTTTTG GAGAGATGGA AGTCTTGTAC GAGAGCGTAA TGCCATGCTT CCAACTATTT CTTCCAAGGA TTGGTTGGAT ATTGATTTTG GAATTGCTGA AGGTGTGGAT TTCATTGCTG TATCGTTTGT CAAGTCGGCT GAAGTAATTA ATCACCTTAA AAGTTATCTT GCTGCTCGTT CCCGTGGAGG GGAAATTGGA GTGATTGCAA AGATCGAGAG TATCGATTCA TTGACCAATT TGGAAGAAAT TATTCTAGCA TCAGATGGAG CCATGGTTGC AAGAGGAGAT CTAGGAGCTC AGATACCTCT TGAACAAGTT CCAGCAGCTC AACAGAGAAT CGTCCAAGTC TGCAGAGGGC TGAACAAACC TGTCATCGTC GCTTCACAGC TTCTGGAATC CATGATTGAG TACCCAACTC CAACCAGAGC AGAAGTCGCT GACGTGTCTG AAGCAGTAAG ACAAAGATCA GACGCATTGA TGCTCTCTGG AGAATCAGCT ATGGGTCAAT TTCCAGACAA GGCGCTCACG GTTCTAAGGA CTGTCAGTCT AAGAATCGAG CGATGGTGGA GGGAAGAGAA ACGCCACGAG TCTGTGCCGC TTCAAGCCAT AGGCTCTACA TTTTCAGACA AAATCTCAGA AGAGATCTGT AACTCTGCTG CTAAAATGGC TAACAATCTT GGAGTGGACG CGGTTTTCGT CTACACAACA AGCGGACACA TGGCGACATT GGTCTCACGA TGTCGCCCAG ACTGTCCGAT CTTTGCTTTC ACAACCACAA CCTCAGTGAG AAGACGCTTA AACCTACAAT GGGGACTTAT CCCATTCCGT CTCAGCTTCT CAGACGACAT GGAAAGCAAC TTGAACAAAA CATTCTCGTT ACTGAAATCA AGAGGTATGA TAAAATCTGG TGACCTCGTG ATCGCAGTCT CAGACATGCT GCAATCAATC CAGGTAATGA ACGTCCCATA ATTTCTCCCT TTTTACAATT TCGCAATCCC GCAAAGAGTG TTTTGTTGCT GTTTTTAGAC TACTCTTACA TTAGATTCCA GAGGCATCGT CAACTTCGGT TTGTTAACAA CAGTAATGTG TAAGCTTTGT TTGTAGTGTA CTGTTTGTTT TTGGTTTTCA ATAATATCAG TAATCTTCTT C 
Length2081
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9700404.. 9703286
Download Sequence
A.thaliana
AGI-codeAT3G22960.1
DescriptionPyruvate kinase family protein
TAIR curator summaryencodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.
Alias[PKP-ALPHA][PKP1][PLASTIDIAL PYRUVATE KINASE 1]
Gene coexpression
MR
MR Locus Description
1 Ahg495356 plastidic pyruvate kinase beta subunit 1
3 Ahg485062 tubulin beta chain 3
4.24264 Ahg487711 ATP synthase alpha/beta family protein
7.87401 Ahg495608 microtubule-associated proteins 65-1
12.1655 Ahg492789 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
14.1421 Ahg492815 small nuclear ribonucleoprotein associated protein B
19.8997 Ahg929958 trigalactosyldiacylglycerol2
22.5389 Ahg486312 ketol-acid reductoisomerase
32.4962 Ahg479500 cell elongation protein / DWARF1 / DIMINUTO (DIM)
35.609 Ahg926872 aldehyde dehydrogenase 10A8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression