Detail



ID : Ahg479500

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479500|fgenesh2_kg.3__2201__AT3G19820.2
Sequence
GGCTGGCTTG AATCACGTTT TATTTATAAA GACAAATCTT CTCTCACTCT TGGGGACACT TTCACATCTC ATCCTCTCCA CTCTCTCTCT CTCTCCTTTG GATTCTTCAG TGAGGAGAGG AAATGTCGGA TCTTCAGACA CCGCTTGTGA GGCCCAAGAG GAAGAAGACT TGGGTTGATT ACTTTGTCAA GTTCCGATGG ATCATTGTCA TCTTCATCGT CCTTCCATTC TCAGCCACAT TCTACTTCCT CATCTACCTC GGGGACATGT GGTCTGAGTC CAAGTCCTAT GAGAAACGCC AGAAGGAACA CGACGAGAAT GTCAAGAAAG TCATCAAAAG GCTTAAGAAT AGGGACGCTG CCAAGGACGG GCTTGTCTGC ACTGCGCGTA AGCCGTGGAT CGCTGTGGGA ATGAGGAACG TTGACTACAA GAGAGCCCGG CATTTCGAGG TTGACTTGGG CGAGTTTCGT AACATCCTTG AGATCAACAA GGAGAAGATG ACTGCTAGAG TGGAGCCTCT TGTCAACATG GGACAGATTT CCCGTGCCAC CGTCCCAATG AACCTGTCTC TCGCTGTTGT TGCTGAGCTT GACGACCTTA CCGTTGGTGG ACTCATCAAT GGATATGGTA TTGAAGGAAG CTCTCACATC CACGGTTTGT TTGCGGATAC CGTTGAGGCT TACGAGATCG TTCTTGCGGG TGGGGAACTT GTCCGTGCCA CAAAGGATAA TGAGTATTCC GATCTTTTCT ACGCAATCCC GTGGTCGCAA GGAACTCTTG GACTCCTTGT AGCTGCTGAG ATCAAGCTTA TTAAAATCAA GGAGTACATG AGACTCACTT ACATACCAGT TAAGGGAGAT CTTCAAGCCT TAGCTCAAGG TTACATTGAT TCTTTCGCTC CCAAAGATGG TGACAAGTCG AAAATCCCGG ATTTCGTCGA AGGCATGGTT TACAACCCGA CGGAAGGAGT GATGATGGTT GGGACATACG CATCGAAAGA AGAGGCGAAG AAGAAAGGAA ACAAAATCAA CAATGTGGGA TGGTGGTTCA AGCCGTGGTT CTACCAGCAC GCGCAGACCG CCCTGAAAAA GGGACAGTTT GTTGAGTACA TCCCGACTAG GGAATACTAC CACAGGCACA CAAGGTGCTT GTACTGGGAA GGGAAGCTTA TTCTTCCATT TGGTGATCAG TTCTGGTTTA GGTACCTCTT AGGTTGGTTG ATGCCTCCAA AGGTCTCTCT TCTTAAGGCC ACTCAAGGTG AAGCTATCAG GAACTATTAC CATGATATGC ATGTTATTCA GGACATGCTT GTTCCTCTTT ACAAGGTTGG CGATGCCCTC GAATGGGTTC ACCGCGAAAT GGAGGTGTAT CCAATTTGGC TTTGCCCACA CAAACTCTAC AAGCAGCCAA TCAAAGGCCA GATCTATCCA GAACCAGGCT TTGAGTACGA AAACAGACAA GGAGACACAG AAGATGCACA GATGTACACT GATGTTGGAG TCTACTACGC ACCTGGACCT GTCCTAAGAG GTGAAGAGTT TGATGGATCA GAAGCTGTAC GTAAGATGGA GAAATGGCTG ATTGAGAACC ATGGATTCCA GCCTCAGTAC GCGGTGTCTG AGCTCGACGA GAAGAGCTTC TGGAGAATGT TTAATGGTGA ATTGTATGAG GAGTGCCGCA AGAAGTATAG AGCTGTTGGA ACGTTCATGA GTGTTTACTA CAAGTCGAAG AAAGGAAGAA AGACTGAGAA AGAAGTTAGA GAAGCCGAAC AAGCTCATCT CGAAACTGCT TATGCCGAGG CAGATTAAGT AATAAGCCTT GGTTTGATGA AATGGCTTGG GATTATTATT GTTATTGCTA GTAGTGTCTG TTATGTTGTT TCCTAATTTC AGTTCTAGTG TCTTGAAGAC TATTGTTGTT GTTGTTTGCT TCTTTGTTGT TGTTGTTGTT TGACTTATTA TGGTTTGAGT GGAGTTTAGA GTTTAAAACT TTTGGATTTG CTTATGAGAT T 
Length2011
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8100895.. 8103641
Download Sequence
A.thaliana
AGI-codeAT3G19820.1
Descriptioncell elongation protein / DWARF1 / DIMINUTO (DIM)
TAIR curator summaryInvolved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.
Alias[CBB1][DIM][DIM1][DWF1][EVE1][CABBAGE 1][DIMINUTIA][DIMINUTO 1][DWARF 1][ENHANCED VERY-LOW-FLUENCE RESPONSES 1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg496807 Leucine-rich receptor-like protein kinase family protein
10.247 Ahg488225 Glycosyl hydrolase family 38 protein
12.7279 Ahg484358 ribosomal protein L15
14.0357 Ahg495608 microtubule-associated proteins 65-1
16 Ahg483311 Rhodanese/Cell cycle control phosphatase superfamily protein
16.8523 Ahg481667 dsRNA-binding protein 2
17.3205 Ahg470596 Chitinase family protein
17.7482 Ahg494557 tubulin alpha-2 chain
19.1311 Ahg483405 Ribosomal protein L3 family protein
19.4936 Ahg484589 Leucine-rich receptor-like protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression