Detail



ID : Ahg479809

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479809|fgenesh2_kg.3__2510__AT3G22990.1
Sequence
GAGCAGAACA ACAGAAGAAT AGTTCTTGCG CTACAAAGTG GTTTAAAGAG TGAGGTTACA TGGGCGTTGA ATACACTTAC ATTGCTTTCC TTTAAGGAAA AAGACGATAT TCGACGAGAT GTCACGCCTC TTGCTAAGAT ATCTGGCTTG CTTGATGCAC TTCTCTTAAT TATAGATGAC TGGCGTGACA TAGCTCTTCC AAAGGATCTA ACAAGAGGAG CTAGGGTTAG GACTTTAGGT ACAAATGCTT CGGTTACGGG ATTTGGCAAT GAGTATGATG CTTTAGCCTC TATTCAACTC CCTGGATCTG GCATTGGTTC TTCAGCTGCT GAGGGATTAG GAAAAAAGAG CGGTGGAAAA CATCAGTCAT CTCAGTGGTG GATGGAAGAG GATGGTTTGT TTAATCTAGA CGATGAAGGG AGATCAGAGA AACAAATGTG CGCCATTGCT GCATCTAACG TTATCCGCAA CTTCTCCTTT ATGCCTGATA ATGAAGTTGT AATGGCTCAG CATCGTCATT GCTTAGAAAC TGTTTTCCAG TGCATACACG ATCATATGAC TGAGGATGAA GAGCTGGTCA CAAACTCGCT CGAGACAATT GTAAACCTAG CGCATTTGAT GGATCTTCGA ATTTTCAGCT CGCTTAAGCA GTCATACATT AACATAAATG AGAAGAAAGC TGTTCAAGCT GTGGTCGGAA TCCTCGATTC TTCCGTCAAA GCTTGGAATT GTGCTGCTGC TGAATTACTG GGGCGTTTGA TTATCAATCC GGACAATGAA CCTTTCATTA GTCCCTTAAT TCCACAGATA CACAAGCGAC TAGTCGATCT CTTGAGCATA CAAGCCGTTG ATGCACAAGC CGCAGCTGTT GGAGCACTCT ACAACCTCGT GGAAGTTAAC ATGGATTGCA GATTAAAGCT CGCAAGTGAG AGATGGGCGG TTGATAGATT GCTAAAAGTG ATAAAGACTC CGCATCCAGT TCCAGAAGTA TGCAGGAAAG CTGCAATGAT ACTTGAGAAC CTTGTCTCCG AGCCTCAAAA CAGAGGATTG CTGCTCGCAT ACGAGAATGC GTTCGCTGAG CTACTTTTTC AAGATGGTAA GTATTCTGAT TCATTTGCTA GGATTTTGTA TGAACTCACT GCTAGATCAA ATAGCAGAGT GGCTTCAGCT AGAGGAATCT GGGGTATGTA AAAGTCTCTA GATTAGTGGG TTTGATTAAT TAAGTTTGTT GTAAACTTTA ATCATTTGCT ATGTATTTGT TAAACAAAGT AGATGGATTC TTCTCATTAT TTCGCATAGC TTCGACATGT GTGTTTTGAT CTTTACTAAA AACAAATTGA GATATATTAT GATTCAAATT G 
Length1361
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9728514.. 9730523
Download Sequence
A.thaliana
AGI-codeAT3G22990.1
DescriptionARM repeat superfamily protein
TAIR curator summaryArmadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues.
Alias[LFR][LEAF AND FLOWER RELATED]
Gene coexpression
MR
MR Locus Description
13.9284 Ahg471074 Cysteine proteinases superfamily protein
14.6969 Ahg928298 Rab escort protein
15.4272 Ahg470848 PDI-like 5-1
16.1555 Ahg493618 O-fucosyltransferase family protein
26.0384 Ahg481186 RING/U-box superfamily protein with ARM repeat domain
26.9815 Ahg483630 structural constituent of nuclear pore
30.4959 Ahg474924 regulatory protein (NPR1)
31.4643 Ahg479745 Eukaryotic rpb5 RNA polymerase subunit family protein
33.9853 Ahg322358 zinc ion binding;nucleic acid binding
39.7995 Ahg488788 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression