Detail



ID : Ahg479745

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479745|fgenesh2_kg.3__2446__AT3G22320.1
Sequence
AGAATCGAGA AAAGGGTTCG GAGGTAAAAG CTTGAAACGC CGCTTCTTCT TCTTCTTCGT CTTCCTCTAT CTCTCTGTAA ATCTCTTCTT CAACCATCTC TGTGGATTTG TCTCTATTCA ATTAATTGGT GAAGAAGATG TTGACGGAAG AAGAAATCAA AAGACTGTAC AGAATCCAGA AGACGTTGAT GCAGATGTTA AAGGATCGTG GCTATTTTAT AGCGGATTCT GAACTTACGA TGACGAAACA ACAGTTTATT AGGAAACATG GTGATAACAT GAAAAGAGAG GATTTTGTTA CTCTTAAGGT TAAGAGAAAT GATAACAGTG ATCAGCTCTA TATATTCTTC CCTGATGAGG CGAAAGTTGG AGTGAAGACG ATGAAGATGT ACACGAACAG GATGAAATCA GAGAATGTTT ACAGAGCTAT TTTGGTTGTG CAACAGAACT TGACCCCTTT TGCTCGAACT TGCATTAGTG AGATCTCTTC AAAGTTTCAT CTGGAAGTTT TCCAGGAGGC GGAAATGCTA GTGAACATTA AAGAACATGT TCTTGTTCCT GAGCATCAAG TTCTTACCAC TGAAGAGAAG AAAACTTTAC TGGAGAGATA CACAGTGAAG GAGACACAGC TTCCAAGGAT CCAAGTGACC GATCCAATCG CAAGATACTT TGGACTAAAA CGTGGGCAAG TCGTGAAGAT CATTCGTCCT AGTGAAACTG CTGGTCGTTA TGTTACCTAT CGTTACGTTG TATAAGCCAA AACAAAAAGC TTTTGTGGAT TGGATTGCGA ATTGAACGCT AGAGTTGTGA AACATAAGAG TAATGCTTTT GTATTAAACC AAACTGTTTG ACTGTGTTTT ATTTTTGTTT GTCAGATATG AGAATTAAAG CTTGAAACAA CTTATTTGTA TTAGTTTTCT ATCCAAAAAC TTGC 
Length934
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9378283.. 9379788
Download Sequence
A.thaliana
AGI-codeAT3G22320.1
DescriptionEukaryotic rpb5 RNA polymerase subunit family protein
TAIR curator summaryNon-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.
Alias[ATRPABC24.3][NRPB5][NRPD5][RPB5A][RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg488249 SWIB/MDM2 domain superfamily protein
5.47723 Ahg480636 ribonuclease II family protein
7.74597 Ahg359344
8.77496 Ahg495151 ubiquitin-conjugating enzyme 27
11.4018 Ahg323367 RING/FYVE/PHD zinc finger superfamily protein
13.9642 Ahg478314 RAB GTPase homolog E1E
17.8326 Ahg914623 eif4a-2
21.2132 Ahg488069 Putative glycosyl hydrolase of unknown function (DUF1680)
21.4243 Ahg473146 Kinase-related protein of unknown function (DUF1296)
21.6333 Ahg473141 SecY protein transport family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression