Detail



ID : Ahg479967

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479967|fgenesh2_kg.3__2668__AT3G24550.1
Sequence
CCATTGTCCA AATTCCTTAC CAAAAAACTC TACTCTCGGT GGCACCAGAT CACTCCTCCT CTCTCTTCTC CTACCTTTTT CACATTCTCT TCTTCTTCTC TTTCTCTCGT GAAAAAGAGA TTCTTTATTC ATTAGATCGA AGAAGCAAAA ATGTCCACAG CGCCGTCTCC AGGCACTACT CCATCACCAT CTCCTCCCAC AAACTCAACA ACCACCACTC CTCCTCCATC TTCCTCTCCT CCTCCCACCA CAACTCCTTC TTCTCCTCCG CCGCCGCCGT CAACTAATTC AACCACTCCT CCTCCTTCTT CTCCTTTACC TCCTTCTCTT CCTCCTCCAT CTCCTCCTGG ATCTTCCACT CCTCCTCTTC CTCAACCTTC TCCCTCCGCT CCCATCACTC CATCTCCACC GTCTCCTTCC ACTCCTGGAT CAAACCCTCG AAGCCCTCCA TCTCCTAACC AAGGACCACC AAACACTCCC TCAGGACCTA CTCCTCGAAC TCCATCTAAC GCTAATCCTT CGCCGCCGTC TGGTTCTTCC GATGGATTAT CTACAGGAGT GGTCGTTGGA ATCGCCATTG GAGGAGTTGT TGCCCTTGTT GTATTGACTC TGATTTGTCT TCTCTGTAAG AAGAAACGAA GAAGAAGACA TGACGATGAA GCTGCTTACT ATGTTCCTCC TCCACCTCCT CCTTCTGGTC CCAAAGCTGG AGGACCTTAC GGTGGACAAC AACAGTATTG GCAACAACAA AACGCATCAC GACCGTCAGA TAATCACGTA GTGACGTCAT TGCCACCACC TAAGCCTCCA TCTCCACCAC GAAAACCTCC ACCGCCTCCT CCACCACCGG CATTCATGAG CAGCAGTGGC GGTTCTGACT ATTCGGATCT TCCGGTTCTT CCTCCACCAT CTCCAGGGCT TGTGTTAGGA TTTTCTAAAA GCACTTTCAC TTATGAGGAG CTGTCAAGAG CTACTAATGG CTTCTCTGAG GCTAATTTGT TGGGACAAGG CGGGTTTGGT TATGTGCATA AAGGTATATT GCCTAGTGGG AAAGAAGTTG CTGTGAAACA GTTGAAAGCT GGAAGTGGTC AGGGAGAGAG AGAGTTTCAG GCTGAGGTCG AGATTATTAG CAGAGTTCAT CACAGGCATT TGGTTTCTCT TATTGGTTAT TGTATGGCCG GTGTTCAGAG ATTGCTTGTC TATGAGTTTG TCCCCAACAA CAATCTTGAG TTTCACCTCC ATGGGAAGGG ACGACCTACG ATGGAATGGA GTACTAGATT GAAGATTGCT CTTGGATCTG CTAAAGGACT TTCATATCTT CATGAAGACT GCAATCCGAA AATCATTCAC CGTGATATTA AGGCGGCAAA TATACTTGTA GATTTCAAGT TTGAAGCTAA GGTTGCTGAT TTTGGTCTTG CCAAGATTGC TTCTGATACA AACACTCATG TATCTACACG CGTGATGGGA ACCTTTGGGT ATTTGGCTCC AGAATATGCT GCAAGCGGAA AGCTCACAGA AAAGTCTGAC GTTTTCTCAT TTGGTGTTGT ACTTTTGGAG CTTATAACCG GGAGGCGCCC TGTTGATGCA AACAATGTCT ATGTAGATGA CAGCTTAGTT GACTGGGCAC GTCCCTTACT TAACCGAGCA TCTGAGGAAG GAGATTTTGA GGGTTTGGCT GATTCAAAGA TGGGTAACGA GTATGACAGA GAGGAAATGG CTCGCATGGT TGCTTGTGCT GCAGCTTGTG TTCGCCATTC AGCTCGCCGC AGACCTCGCA TGAGCCAGAT AGTACGCGCC TTAGAAGGAA ATGTATCGCT GTCTGATCTT AACGAAGGGA TGAGACCAGG TCACAGCAAC GTCTACAGCT CATATGGAGG AAGCACAGAC TATGACACAA GCCAATACAA CGACGACATG AAAAAGTTTA GGAAAATGGC ACTAGGAACT CAAGAATACG GCACAACCGG CGAGTACAGT AATCCAACAA GTGACTACGG ACTGTACCCA TCTGGTTCGA GCAGCGAGGG TCAAGCCACA CGAGAAATGG AGATGGGGAA GATTAAAAAA ACTGGTCAAG GTTATAGTGG ACCTTCTCTT TAAACCACAA GAGATGAGAA AATTGCAGGG GTTTTTGGAT TCTTTTTCTT ATTAACTGTA AAGATTTGAG GAAATTGCCT TACTCTCTAA TTGATCTACT ACGATATAGG TTTCTTCTTT AGATGTTGTG ATGTTTTTGA TTCTTGGTTG AATATTATTC TTTCATTCTT TTTT 
Length2274
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11191701.. 11195068
Download Sequence
A.thaliana
AGI-codeAT3G24550.1
Descriptionproline extensin-like receptor kinase 1
TAIR curator summaryencodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.
Alias[ATPERK1][PERK1][proline-rich extensin-like receptor kinase 1]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg485412 GRAS family transcription factor
8 Ahg470302 Eukaryotic aspartyl protease family protein
18.7617 Ahg921879 VQ motif-containing protein
20.199 Ahg951415 hydroxyproline-rich glycoprotein family protein
24.7386 Ahg943817 Arabidopsis phospholipase-like protein (PEARLI 4) family
26.7208 Ahg477950 HCO3- transporter family
28.0357 Ahg482304 Protein kinase superfamily protein
28.1425 Ahg484026 phosphatidic acid phosphatase 1
29.7489 Ahg951624 armadillo repeat only 2
32.8634 Ahg496923 GRAS family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression