Detail



ID : Ahg479972

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479972|fgenesh2_kg.3__2673__AT3G24590.1
Sequence
AGTTGATGAT GGTGATGATA TCTCTTCATC TCTCTACTCC GCCGCTAGCT TTTCTCAAAT CTTCTTCCAA TTCTAGATTT TCCAACAACC CTAATCCTAA TTTTGTCCAA TTCACTCCAA AATCCCAACT TTTTTCTTGC CGTCGTTTCA ATTTCAACAC CGGAGTAACA AATTTAAACC GGAGAAGTCT GAGTTGCTAT GGGGTTAAGG ATTCAAGTGA GACAACGAAG TCTGCACCGT CGTTAGACTC CGGCGGCGGC GGTGACGGCG GAGATAGTGG TGATGATGTT GAAGGTGAAG TGGAGGAAAA AAACAGGCTT TTTCCGGAAT GGTTGGATTT TACATCGGAT GATGCGAAGA CTGTGTTTGT GGCTATAGCT GTATCGTTGG CGTTTCGTTA TTTTATTGCA GAACCAAGAT ACATTCCTTC TTTGTCTATG TATCCTACTT TTGATGTTGG AGACAGATTA GTTGCAGAGA AGGTGAGTTA TTATTTTAGG AAGCCTTGTG CAAATGATAT TGTGATCTTC AAAAGTCCAC CAGTTCTTCA GGAAGTTGGG TATACTGATG CGGATGTATT TATTAAACGG ATTGTTGCGA AAGAAGGTGA CCTTGTGGAG GTACATAATG GGAAACTGAT GGTTAATGGT GTTGCTAGGA ATGAAAAATT CATCTTAGAG CCTCCTGGAT ATGAAATGAC ACCATTTAGG GTTCCGGAAA ATTCAGTATT TGTGATGGGT GACAACCGGA ATAACAGTTA TGATTCACAC GTGTGGGGTC CTCTGCCTTT GAAGAATATT ATTGGACGGT CAGTTTTTCG GTATTGGCCA CCAAACAGAG TAAGCGGGAC AGTGCTAGAA GGTGGCTGTG CAGTGGATAA GCAATAGAAC ATATTGGAAC GTTTTGATTC TTCCTTTTAA ACACTTGTGC AGATAAAAAT GAAAACAATG TACCTTTCTA TGAAGGAGAG AGTTGCACAT TTGAATTGGA CTGCAGATTA ATGAGAAAAC AAGAAATTCT TATTTGC 
Length1027
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11224493.. 11226027
Download Sequence
A.thaliana
AGI-codeAT3G24590.1
Descriptionplastidic type i signal peptidase 1
TAIR curator summaryEncodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).
Alias[PLSP1][plastidic type i signal peptidase 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg494440 CLP protease P4
16.1245 Ahg470544
18.735 Ahg939414 ribosome recycling factor, chloroplast precursor
21.2603 Ahg486819 Chalcone-flavanone isomerase family protein
24.8193 Ahg487276 NYC1-like
25.807 Ahg938418 CAX interacting protein 1
27.9643 Ahg470540 photosystem II 11 kDa protein-related
31.3688 Ahg474174 Saccharopine dehydrogenase
32.8634 Ahg329483 Pentatricopeptide repeat (PPR) superfamily protein
36.0278 Ahg470295 FZO-like
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression