Detail



ID : Ahg329483

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329483|fgenesh1_pm.C_scaffold_7001710
Sequence
ATGCTTAGCT TGAGATATTC ATTACCTTAT CTTCTTCTTC AAACAAGGGA ATCATCAACT AAGCTCTTCT CCAAAAGGCC TAACAATGTT GTGGTTTGTG CGGCGAGAGG TCCAAGACCT CGGTCTCCTC GAGTATGGAA AACAAGGAAG AGGATTGGAA CTATCTCCAA GGCTGCCAAA ATGATTGCTT GTATAAAAGG ATTGTCGAAT GTTAAAGAAG AAGTTTACGG AGCGCTTGAT TCCTTCATTG CTTGGGAGTT AGAGTTCCCT CTTGTTATAG TTAAGAAGGC ATTAGTTATA CTTGAAGATG AAAAAGAGTG GAAGAAGATT ATTCAGGTGA CAAAATGGAT GCTGAGTAAA GGCCAAGGAA GAACAATGGG AACTTACTTC TCATTACTAA ATGCTTTAGC AGAAGATAAT CGGCTTGACG AAGCTGAGGA ATTGTGGAAC AAGTTGTTCA TGGAACATTT AGAAGGAACT CCTAGAAAGT TCTTCAACAA AATGATCTCT ATATATTACA AGAGAGATAT GCACCAAAAG CTCTTTGAGG TATTTGCTGA CATGGAGGAG CTTGGAGTGA AACCGAACGT TGCGATTGTG TCTATGGTTG GAAAAGTGTT TGTGAAATTA GAGATGAAGG ATAAGTACGA GAAACTGATG AAGAAATATC CTCCACCTCA GTGGGAGTTC AGATACATCA AAGGAAGACG CGTTAAGGTC AAGGCAAAGC AGCTAAATGA GCTAAGCGAA GGTGAAGGTG GTTTAAGCAG CGATGAAGAT AAGATTGATA CTGAGATTGA GAGTAAATCT AAAATGTTGT CAGATAAGGA ACCAGAGCAA GATGGTGAGG ATCTCAGTGA AGAGGAAGAA GATGAAAAAG AACTTTTGGG TGGAAATCAA GGACAGATTG GAACTTCTAG AGAACCCAGT CTTGATCATT TGGACTCTTC ATGA 
Length954
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8812413.. 8813727
Download Sequence
A.thaliana
AGI-codeAT4G21190.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias[emb1417][embryo defective 1417]
Gene coexpression
MR
MR Locus Description
1 Ahg327738 receptor-like protein kinase 4
7.07107 Ahg947434 glutamate receptor 5
7.54983 Ahg922683 ATP-dependent protease La (LON) domain protein
9.16515 Ahg496108 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
10.3923 Ahg928451 Rubisco methyltransferase family protein
10.8167 Ahg481209
11.8322 Ahg496566 RING/FYVE/PHD zinc finger superfamily protein
12.8452 Ahg474748 Major facilitator superfamily protein
14 Ahg496246 Transducin/WD40 repeat-like superfamily protein
14.3178 Ahg476511 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression