| Annotation |
|---|
| Description | jgi|Araly1|480074|fgenesh2_kg.3__2775__AT2G04240.2 |
| Sequence |
TTTCACACCC AATAAAAACT TCATCTTTCT TCTAAATTGT TCATGATCGC TTCTCATATT TGACTCTAGA GGTTCGTAGT TTTCTCTAAA GTTTCGATTT TTCCCCAATT TTTAACCTTG ATTTTGGCCC AGATTTTAAA TTTTTGTTAT TGGTTTCACA AAGTTTGCAT CTTTTAGAGG TTTTGATCTG TGTTTCTTGA TTTAGAGTCA AATTTTGTGT GTGGTACGAA CAAAGACTTG ATCTTTTGGT TTGATGGTAG TAGAAATTGA ATAAAGATTT GTTCTTGAAC CCTTTTGATA CTGATTAGTG TTAATTGAAT TAAAGCTTTG TGCTTTGGTT TTGATTTGCT AAGCTTTAGA GTTATTTCTG TTTCTGGATC ATATGAGACC TTCAAGTCTC TTGCTTGTTC ATACTAAACA TTGATTGTTA TTGAAATCTA TGTGCTTTGG TTGGAATTGT CTTGAAGTTT TCATATATTG TGTGTTAATA GCCTATAATG GTGTTTTTCA GACAAACATC ATTTCTACCG ACAAAGATTG GATATCCAAT CCAAGAATTG AAAGATGGGT TTATCAAGTC TTCCTGGTCC ATCAGAAGGA ATGTTATGTG TGATATTAGT AAACACAGCA TTATCGATCT CCATTGTTAA AGGCATTGTC CGATCAGTCC TTGGCATAGT AGGAATCAGT CTCTCGCCGT CTTCATCCTC GCCTTCCTCA GTGACGGTAT CTTCAGAGAA TCCAACTTCA GAGCCTTTTG ATTTCCGGGT TTGCCAACCA GAGAGTTTCC TTGAGGAGTT CAGGAACCGG ACTCCAACAC TGAGGTTTGA GAGCTTGTGC AGGTGCAAGA AACAGGAGGA CAACGAGTGT TCGGTGTGTC TGTCGAAATT CGAAGGGGAT TCAGAGATCA ACAAGCTAAA GTGTGGCCAT TTGTTTCACA AAACATGCTT GGAGAAATGG ATAGACTATT GGAACATTAC TTGCCCACTG TGTAGGACTC CTCTTGTTGT TGTGGCAGAA GACCATCAGC TTTCTTCTAA TGTTTGGTGA CTACTTTTCA CTGTATAGGG TTTTTGTTTG GGTGTGTTTG TTGTGTAGAG CTACTTTACT ATGAATTAGG CTGCATCGCG GTTGATTCTC AAACAGATTT AGACCGGGGA TGGGATAATC TGATGTACAT ATATATATAT ACCCATGTGT AATGGAGCTC GTGTTTGAAC ATAGTTTTC |
| Length | 1229 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 12441642.. 12443018 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G04240.1 |
| Description | RING/U-box superfamily protein |
| TAIR curator summary | Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism. |
| Alias | [XERICO] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14 |
Ahg928811 | senescence associated gene 20 |
| 15.4596 |
Ahg488204 | pheophytinase |
| 31.0322 |
Ahg490525 | Protein of unknown function (DUF3741) |
| 39.064 |
Ahg487142 | Pyridine nucleotide-disulphide oxidoreductase family protein |
| 41.7133 |
Ahg946655 | Papain family cysteine protease |
| 42.2137 |
Ahg474823 | production of anthocyanin pigment 1 |
| 43.6807 |
Ahg899427 | Glucose-1-phosphate adenylyltransferase family protein |
| 47.3286 |
Ahg935652 | homeobox 7 |
| 47.592 |
Ahg919779 | branched-chain amino acid transaminase 2 |
| 51.5752 |
Ahg476384 | Protein of unknown function (DUF1677) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|