| Annotation |
|---|
| Description | jgi|Araly1|480186|fgenesh2_kg.3__2887__AT2G05710.1 |
| Sequence |
CACACAGACC TAGGCATTTT CGTTTCGTCT CCACACGCCT CCACGTCAGA TTCATCATCA TCAACCTCCA TGATCGTTCC CAATTGATCA ATCACAAACC TTATCTTCTT CTTCTTCTCT GTCAGTATCT GAATCTGCAT CTGGAAGCGT GATTTCATCA TCATGTATAT AACTGCTTCA TCTTCCGCTT CTTCCTCTAT CATTCGAGCT GCTTCTTCTC GCTCTTCTTC ACTCTTCTCC TTCCGATCGT TTTTATCTCC GTCCGTTTCA TCTACTTCAC CGTCGTCACT TCTCGGTCGT AGATCTTTTG GTACCATTTC ACCTGCTTTT CGTTCATTTC CTCGCTGGAG CCATTGCTTT CACTCAAAAC CATCTCCGTT TCGCTTAACC ACTCAGATCA GAGCTGTTTC TCCAGTCTTA GATCGTCTCG AGAGAACCTT CTCTTCCATG GCGTCAGAGC ATCCGTTTAA AGGGATCTTC ACTACTCTTC CTAAGCCTGG TGGTGGTGAA TTCGGAAAGT TCTATAGCTT ACCTGCTCTT AATGATCCAC GAATTGATAA ACTTCCTTAC TCTATTAGGA TTCTTCTTGA ATCTGCGATT CGTAATTGTG ATAACTTTCA AGTTACTAAG GAAGATGTTG AGAAGATTAT TGACTGGGAA AAAACATCTC CTAAACAAGT CGAGATTCCG TTTAAACCGG CTCGTGTTCT TCTTCAGGAC TTTACTGGAG TCCCAGCTGT TGTTGACCTT GCTTGTATGC GTGATGCGAT GAATAAGCTG GGCAGTGATT CCAACAAAAT CAATCCTTTG GTTCCGGTGG ATCTTGTGAT TGATCACTCG GTTCAAGTTG ATGTTGCTAG ATCTGAGAAT GCAGTGCAAG CAAACATGGA GCTTGAGTTC CAGAGGAACA AGGAGAGGTT TGCTTTCCTT AAGTGGGGTT CTACTGCGTT CCAGAACATG CTTGTTGTGC CTCCTGGCTC TGGTATTGTG CATCAGGTCA ATTTGGAATA TCTTGGAAGA GTTGTGTTCA ATACCAAAGG CCTTCTCTAC CCAGACAGCG TGGTTGGAAC TGATTCACAT ACAACTATGA TTGATGGTTT GGGAGTTGCT GGATGGGGAG TTGGAGGCAT TGAAGCTGAG GCAACAATGC TTGGGCAGCC CATGAGTATG GTATTGCCTG GTGTTGTTGG ATTCAAACTG GCCGGAAAAA TGCGTAATGG TGTAACAGCT ACTGATTTGG TTCTAACAGT GACTCAAATG CTGAGGAAGC ATGGTGTTGT TGGAAAGTTT GTTGAGTTTT ATGGTGATGG TATGAGTGGG CTGTCCCTAG CTGACAGGGC AACCATTGCC AACATGTCTC CCGAGTATGG TGCAACCATG GGCTTCTTCC CTGTGGATCA TGTTACTCTA CAGTATCTCA AATTGACTGG AAGAAGCGAT GAGACAGTGG CCATGATTGA AGCATATCTT CGCGCAAACA ATATGTTTGT TGACTACAAT GAGCCTCAGC AAGACCGGGT CTACTCATCA TATCTAGAAC TGAACCTGGA TAATGTTGAA CCTTGCATTT CTGGACCAAA GCGGCCACAT GATCGTGTTA CTTTGAAGGA TATGAAAGCT GACTGGCATT CATGTCTTGA CAGTAAAGTT GGGTTCAAGG GTTTTGCTAT ACCTAAAGAG GCACAAGAAA AAGTGGTAAA TTTTTCGTTC AATGGACAAC CAGCAGAGCT TAAACATGGA AGTGTGGTGA TTGCTGCAAT CACAAGCTGT ACTAATACAT CAAATCCCAG CGTCATGCTT GGTGCTGGTC TTGTTGCAAA GAAGGCTTGT GACCTTGGAC TACAGGTTAA GCCTTGGATA AAGACAAGTC TTGCGCCGGG CTCAGGAGTT GTTACAAAAT ACTTATTAAA GAGTGGACTG CAAGAATATC TGAATGAACA GGGTTTCAAT ATTGTCGGCT ACGGGTGCAC TACATGCATT GGGAATTCTG GAGAAATTAA TGAATCAGTG GGAGCTGCTA TTACCGAAAA TGACATTGTG GCGGCTGCTG TTCTTTCCGG GAACAGGAAC TTTGAGGGGC GTGTTCATCC TCTAACAAGA GCCAACTACC TTGCTTCTCC TCCTTTGGTG GTTGCCTATG CTCTTGCTGG CACGGTTAAC ATTGACTTTG AAACGGAGCC TATTGGCACT GGAAAGAATG GCAAGGATGT CTTCCTAAGA GATATCTGGC CAACCACGGA AGAAATTGCT GAGGTTGTTC AATCCAGTGT TTTGCCTGAC ATGTTCCGAG CAACATACGA GTCAATCACC AAGGGTAACC CCATGTGGAA TAAGCTGTCT GTTCCTGAAA ATACCCTTTA CTCATGGGAT CCCAACTCTA CTTACATTCA CGAGCCTCCA TACTTTAAGG ACATGACCAT GGATCCTCCA GGGCCACACA ATGTGAAGGA TGCTTACTGT TTGCTCAATT TTGGGGACAG TATCACCACT GATCACATTT CACCAGCTGG GAACATCCAA AAGGACAGTC CTGCTGCAAA GTTTCTCATC GAGCGTGGCA TTGACCGTAA GGACTTCAAC TCATATGGAA GTCGCCGTGG GAATGATGAA ATAATGGCCA GAGGCACTTT TGCTAATATC CGTATCGTTA ACAAGCTCAT GAATGGTGAA GTTGGCCCTA AGACGGTTCA CATTCCATCT GGAGAGAAGC TCTCAGTCTT CGATGCAGCC ATGAGGTACA AGTCATCTGG TGAAGACACA ATTATTCTTG CTGGAGCTGA ATATGGAAGT GGTAGCTCAC GTGATTGGGC TGCCAAGGGA CCCATGCTAC AGGGCGTTAA AGCGGTGATT GCAAAGAGTT TTGAGAGGAT TCACCGAAGC AACTTGGTGG GAATGGGAAT CATTCCCCTG TGCTTTAAGT CCGGGGAAGA TGCAGATACT CTTGGATTGA CTGGTCACGA ACGCTACACA ATCAATCTCC CAACCGATAT CTCAGAGATA AGACCTGGCC AAGATGTTAC TGTCACTACC GACAACGGGA AATCTTTCAC TTGCACAGTC CGCTTCGACA CAGAGGTGGA ATTGGCATAC TTCAACCATG GAGGCATACT TCCATATGTT ATCAGAAACT TGAGCAAGCA ATAGACACAA TTTATGGAGC AAAATAAAAG AGATTTTTTC TGTTTAAAGT TGTCATTTTT AAAAGGCAGA TAAGTCTGTC TAGGATTAGG TTAAAAGGTG AGTGATCTCA TGCAATATGA GAGTTGCAGT GTGTTATTAC ACGTTTGGGC TCCCAAGTTT TGCAACTTGC AACCGCTCAA TGTTATTGTT TTTGGAAAGG AATAAGAGAG CCTTCCTGCA TATTCCCATT GCTGACTCCC AAATACCTCG CAATCCGTTG CATTTCACAA GCGTATTCAG CAGCTTCTAT ACCACTTCTC ATATCAGGTT C |
| Length | 3451 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 13309515.. 13349987 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G05710.1 |
| Description | aconitase 3 |
| TAIR curator summary | Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. |
| Alias | [ACO3][aconitase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.83095 |
Ahg495910 | homolog of yeast FIP1 [V] |
| 8.60233 |
Ahg481564 | DNAJ heat shock N-terminal domain-containing protein |
| 8.83176 |
Ahg919122 | casein kinase like 13 |
| 10.0995 |
Ahg916552 | |
| 18.1384 |
Ahg947410 | glutamine synthase clone R1 |
| 18.5742 |
Ahg474140 | target of rapamycin |
| 20.567 |
Ahg491836 | gamma-glutamyl transpeptidase 4 |
| 20.7846 |
Ahg497065 | NAD(P)-binding Rossmann-fold superfamily protein |
| 21.5639 |
Ahg940489 | Major facilitator superfamily protein |
| 22.6274 |
Ahg496924 | succinate dehydrogenase 1-1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|