| Annotation |
|---|
| Description | jgi|Araly1|495910|fgenesh2_kg.8__1726__AT5G58040.1 |
| Sequence |
GCCGAGACTT GTTGAGAAAG AAGCCCTTAG CTTCACCGTC TCTCTCTTTC TCGTGAGCTT CTTTCGAATC GGCCGTTCTT CTTCTTCTTC CAATATCTCT TACTCCAATG GAAGAAGACG ATGAGTTCGG AGATCTGTAT TCCGACGTTC TCCAGCCGTT TCAACCTCCC GTTGTTCTCC CACCTCCGCC TCCTCTTCCT CATCGTTCTA TCGACCTCAA CCTCCGATCC CAAGATCAAG ACGTGGCAGA ACCTAATTCA GCTTCAATCT CTAGGGTTTC AGACAACGAT GCTTTAAAAT TATCCACCAC GCTCTCTCAG GACGCGACTC GTCAAGCAAT TGTCGATGGT GGCGGCGACG ATAAGGACAT GAGCTTTGAT ATCGAAGAAC CCGATGCCGA TTCTACACCT ACGATTCCTG GTCTTTTCGT CACCGCTTCT GAAGCTGGAG CGTTACCTGG TTTGGTTACA GATCGAGGCG TTTCGCAAGT TACGACAAGA ATTGAGCAGC AGGTTGGTGG TGGCGGCGAT GGACAAGGAG AAGGAGATGA TTGGGATAGC GACAGTGAAG ATGATTTGCA GATAGTGTTG AATGATAGTA GCCGCAACGT CATGATTGGA GGAGCTGATA GAAGATCAAG AATGGGAGAC AACGAAGATG ACGATGACGA AGATGATGAA GACCCACTTG TTATAGTGGC TGACACGGAT CCAAATCAAC CGATGGAGGA GCAGCTGTGG GGAGAAGATG GTCTGCAAGG AATTGAAGGA GATGGCAAAG ATGGAGGAGA AGCTGGGAAG GGAAGTGGAC CAGGAGGTGC TACTGGACCG CCCAAAGCAG GGTATAGCAG TCATGGGTAT CATCCGTTTC ATTCTCAGTT TAAGTATGTA AGACCGGGGG CAGCTCCCAT TCCTGGAGGT GCTGCATCTG TTGGTGGGAC CTCCTCAGGT CAAGTTCGTC CACCTGCCAA CCTTGGTCCT TTGGCTGGTC GTGGCAGAGG AGATTGGCGT CCACTGGGAA TGAGAAATGC TTCTGCTGCA CAGAAAGGCT TCCATCAGCC TTGGGGTAGT AACACAGCAG GGCGGGGACT GGACTTTACT CTTCCCTCTC ACAAGACTAT ATTTGAGGTT GACATAGAGA GTTTTGAAGA GAAGCCCTGG AGATATCCAG GAGTTGATAT GACAGACTAC TTCAACTTTG GACTAAATGA AGAGAGCTGG AAAGACTATT GCAAACAGCT GGACCAACAC CGTATCGAGA CTACGATGCA AAGCAGAATA CGCGTTTATG AAAGTGGTAG AACAGATCAG GGTTATGATC CAGATCTACC ACCAGAGTTA GCTGCAGCAA CAGGCGCGCA GGGTGTTCCA GTTGATTCTT CAAATTTAGT GAAGCCAGAC TCTGTTCAAG GTGATTCAGC TAAAGTACCA GCCAATGTTC GACCTTCACT ACCCCCTGGA AGACCCATAC CTGTGGAGGC TGGTTCTGGT GAACGTCTAC CATCCATTGA TACACGTGCT CCTCGAATGC GTGATCTAGA TGCTATCATT GAGATTGTGT GTCAGGATTC ACATGAGGAT GAACCCTCGG GTGAAAATGG CACAGATCAA GCTGATAGTA GCCTTCCTGA AGAAAATGTC CCAGTTGAGA CTAGTTATGT TAACAGCAGG AGACCTGACA CGGAATCTGC TGAACATAGT CCTGCGCAGG ATGAGCCACT GAAAAATCTT CTCAAAAAGC AAGACGATGA GATCTCTAGA AGCACGGATA GTGGCCAGAG TTTTCGTTCA TCGTCTCCTG TTGGAGACAG AGGCACAAGG TCATCAAGTG TTGATCGCGA AAATGTGGGA GGTGAAGCTG GCAAAGATGC TGAGATGGGG GAGGATCATA AAATTAGTTC TAAATTCCCT CAGTCAGCAG TTCAAGAAGA TGATGGAGGG GAATCAAAGA CGGAGAGGAG TAGTGAAAGC AGCAAAGCAA GATCTGGAAG TCACAAAGAT TATCAGCAAT TGAAGGATGG TGCAGAAGAG GAAGTTATTC AAGATAAGCA TTATACTCGA CCAGCTAGCA ATAGGAAACA GCACGATAAC AATGCACCGC ATCAGAGCAG AAAGAATCAG GACAGAGGGA AGGAAATGGA AAGAACACGA GCGGCGAGCA AAGGTGGTAG AGAGAACTCT AATCCCCATA TGGAGCTTGA TTCTAGTTAT ATCTACTCAA TTGCAAACCG CGAGGATTTT GATAAAAGAA AAGAGCGAGA TGTTGACGGC GGGGTCTGGC GCAGGAAAGA AGATGACCCA TACAGTAGAA GAGGTGGGGA TGACGGGTCT AGAAAAAGGG ATCGTGAAGA TGATCCTGGC TTTAGGCAGA GGGGTAAAAT GCGAGAGAAT GAAATACGCA GCAAAGATGA CCATGTTCCT TCCAGAAAGC ATATGGATGA TGCTGGTATG AGAAATAATT ATGAAGCGGA TGATCACATT AGCAAGAGGA GGAAGGATGA AGAATACTTG AGAAGAAGCC GGCCTGAAAA AAATGAAATC TCATATGGTC AAAGAGAATC AATCAGCCGC CTGAAACGAG AACGTGATGA TAGGTTGGAG CATCAAAAGA GAGATGTCCA ACATAAAATC AGAGATGATT TTGACGACCA CAGTTCTCTC AGGCACAGAG ATGATATCTA TATGCAGAGA GATGGAAACG AGAGGTTGAG GGAGCGTGAT GATTTGGATA AATTGAAGCT AACTCACGAG GATGGTATAT CAGCACGAGG AAGAGAGAGG CAGGTGGCTG TAAGGGCTCA CAGAGGTTCA GAAGACCGAC TATCAAGGAT GAAGGATGAG TATAAAGCTT CTGACAAAGA TCATCTCACC AAAGATACAT TAAGGCATAC TAAACAGACA AAGAGAAGGG ACTACCCTGG TGAAGAAAGT TCTTCCCATC ATAGAGGACA TGAAGACTTC TCTGCACGGA CAGACGACAT TGTTAACAAT GAGAAAAAAC CAAGGCAGGA GAGGACAGGT GCTAAAATTG ATAAGTTTAT TGATACTTTG GATGGCCAGC GATTGCAAGA CAGAAAACAT AAAGATTCTA GACGAAAGAT TAAAGAACAG CGAGAGGGCA CAGAATCATT GAGGAGCAAG CAAGGGGAGC AAAATGGCAG TTCCGTAGTG ACAGGCTCAA AAGGAACAAA CGAAGCAAGG AATTGCAGGA GTGAGAACCC ACAGCAGCCT AACCCCGCCA AAAGACACAA GGAAAATGCA TCCTCTGGTG ATGAGCTACA CGATTCAAAG AGAGGACGTA CAAAACTGGA GCGTTGGGCA AGCCACAAAG AGAGAGATGA TACTGTCTCT GCCAAGTCAT CATCCATTTC CTCAAAGCTT GAAGAAAATG ACAAAAACAC TAACGGCAGG CTTAGTGAAC CTGTTCATGG TTCTATTAGC AAGAGCCGGG ATGTAACTGA AGAGAAAAGT GGCCATAACC TTGCAGAGAC CAAAGATGGA AGCGAGAAGG GACCAGGAGA CTGGCACTTG GACACGGTTG AGAAACTCAA GAAACGCAGT GAAAGGTTCA AGCTTCCAAT GCCCACGGAG AAAGACACCA CGGGAGTTAA GAAAATGGAG TCTGAGACAC TGCCCTCTGC AAAAATTGAA GGCCCTGTGG ATTCAGAGGG AGAGTATGTG TGGGATGAGC TAAGTTGTGT AAGAATAGGG AGGGAATACG CTTAA |
| Length | 3725 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17291506.. 17296747 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G58040.1 |
| Description | homolog of yeast FIP1 [V] |
| TAIR curator summary | Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. |
| Alias | [ATFIP1[V]][ATFIPS5][FIP1[V]][FIPS5][homolog of yeast FIP1 [V]] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg483031 | RNI-like superfamily protein |
| 5.83095 |
Ahg480186 | aconitase 3 |
| 12.2474 |
Ahg474651 | ubiquitin-protein ligase 1 |
| 14.1421 |
Ahg495958 | HEAT/U-box domain-containing protein |
| 14.4914 |
Ahg470601 | RING/U-box superfamily protein |
| 15.8745 |
Ahg933960 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 22 |
Ahg485820 | suppressor of abi3-5 |
| 22.0907 |
Ahg471053 | phytochrome A |
| 24.454 |
Ahg924607 | transcription factor jumonji (jmjC) domain-containing protein |
| 26.8328 |
Ahg480306 | chromatin remodeling 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|