Detail



ID : Ahg480281

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480281|fgenesh2_kg.3__2982__AT2G11520.1
Sequence
AAAGAAACAG AACACGAATT TTCAAAGTTT TCCACACGAT GTCTTCCATG AGATCGTTAC CACGTCCCTA ACTCTCCTCC TTCAGACAAA ATACTTTTAG TCTTCTTTCT TTGGTATACT TGTCTGAAAA CAAAATAAAT CTTTGTTTTC GGTCAAACTG ATTCATATAC TGTACAGTCA AGTCAAAGCT ACAAGATCGT GTTCCAGGTT TAGAGAAAAT CTTCTGAACT CTAAGATTCT CATAATTGAG TTTATAAATG GTTTATTGAA GTTGAGTATT TTGTTGATAT AAACAAAATT ATGGGTGGAG ATGATTTCAG CTTCACAAGA TTGGTGTGTA CTGCTTTGTT TGGTCTGTTA ATGTTATTGC AAATCAAGGA AACTTCTGCG TCAGCATCCT TTGTAAGCTC GAGCGTTTGT CGGTCTGATC ACTTGACCTA CACAAAGCCT TATCAACAAG GGAGTTTGTT CACTATTAAC GGGAATCCGG TGGAGAAAGT CCGGTTTTGC GAAGCCTTAC GGTTTCACAA AGCCAATGGT TGTATCTTTG GGGATTCTTT CTGTGATGAC TTCTGCACAG TTCACTATCT ACTAGGGAGA AGGTTTTTGG AAGAGAAATC TGTAAAAGAT TCCAAAAATA GTAAGCCTAA ATCTGAATAT AGCCATGTTA AAGTCAGCAT GGCAGGAAGC GGGTTTCTTC TCTTGTGTTG CGCGCTTTGT TGTCCTTGCT TCCATAAGGA GAGGAAAGCA AATAGTCATG AAGTTCTACC CAAAGAATCT AACTCAGTGC ACCAAGTTTC CTCTTTTGAA ATGAGCCCTT CTTCTGAGAA GATTCCGCCT AGTCCATTCC GGGCACCACC AAGTCCATCC CGTGTACCGC AAAGTCCATC TAGATATGCT ATGTCCCCAA GGCCTAGTAG ACTGGGACCC TTGAATCTGT CCATGAGTCA AATTAATGCA GCAACCAGCA ATTTCTCAGA CAGTCATCAA ATCGGTGAAG GAGGCTTTGG GGTAGTCTAT AAAGGCTTTC TAGATGATGG CCAGGTGGTT GCCATAAAAC GAGCAAAAAA GGAACACTTT GAGAATCTGC GAACGGAATT CAAAAGTGAA GTTGACCTTT TGTCTAAAAT TGGCCACCGG AATCTAGTGA AGCTTCTTGG TTATGTTGAT AAAGGAGACG AGCGACTTAT CATAACCGAG TATGTCAGAA ATGGTACACT CCGCGATCAC TTGGATGGTG CTCGTGGAAC TAAACTTAAT TTCAATCAGA GGTTGGAGAT TGTGATTGAT GTCTGCCATG GATTGACCTA TCTCCATTCT TATGCAGAAA GACAGATAAT CCACCGTGAC ATAAAATCCT CAAACATTCT ACTCACGGAT AGCATGAGAG CCAAAGTGGC AGACTTCGGG TTTGCAAGAG GCGGTCCTAC TGACTCGAAC CAGACCCACA TTTTAACTCA AGTGAAAGGA ACCGTTGGTT ATCTCGATCC TGAGTACATG AGGACTTATC AGCTCACTGC CAAAAGCGAT GTTTACTCAT TCGGGATTTT GCTTGTGGAG ATACTCACAG GCCGTCGTCC AGTGGAGGCC AAGCGACCTC ATGATGAGAG GATTACAGTT CGATGGGCAT TCGACAAGTA CAATGAAGGG AGAGTTTTTG AACTAGTGGA TCCAAACGCG AGGGAACGAG TAGATGAGAA GATACTAAGA AAGATGTTTA GTTTGGCATT TCAATGTGCT GCTCCTACCA AAAAAGAGCG GCCGGACATG GAAGCTGTTG GGAAGCAGCT TTGGGCTATA AGATCAAGTT ATCTCAGGCG GTCAATGGAA TAAAACAAAA TGCTATAGTC TCTCTGTTGT TAGATAATAT TACCTCTTTT ACATTTTGCT ATGAAACCAC TTCTTCGTCA GATTTGAAAT GAGATGTCTT ATTCAT 
Length1936
Protein Sequence
Protein Residue
Map Locationscaffold_3: 16535137.. 16538240
Download Sequence
A.thaliana
AGI-codeAT2G11520.1
Descriptioncalmodulin-binding receptor-like cytoplasmic kinase 3
TAIR curator summaryhigh overall homology to CRCK1
Alias[CRCK3][calmodulin-binding receptor-like cytoplasmic kinase 3]
Gene coexpression
MR
MR Locus Description
18.3848 Ahg477807 RING/U-box superfamily protein
19.8997 Ahg495647 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
21 Ahg486308 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.2838 Ahg489755 MAPK/ERK kinase kinase 1
28.5307 Ahg480564 GCIP-interacting family protein
29.3939 Ahg901754 ENTH/VHS/GAT family protein
31.1769 Ahg476255 Plant protein of unknown function (DUF639)
33.0454 Ahg487925 transducin family protein / WD-40 repeat family protein
37.4166 Ahg470649 acyl-CoA oxidase 3
40.8167 Ahg943129 Copper amine oxidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression