Detail



ID : Ahg901754

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|901754|Al_scaffold_0004_2404
Sequence
ATGGCGTCGT CTTCAGCTTC GGCGACGGTG GCTGTTGATA AAGCAACCAG CGATCTTTTG TTAGGTCCTG ATTGGACTAC GAACATGGAA ATCTGCGATT CTGTCAATTC TCTTCACTGG CAGGCGAAAG ATGTCGTTAA AGCTGTGAAA AAGAGGCTGC AACATAAGAG CCCCAGAGTT CAACTACTTG CTCTTACGCT TTTGGAGACG TTAGTAAAGA ACTGTGGAGA TTATTTGCAC CATCAAGTTG CAGAGAAAAA CTTATTGGGG GAAATGGTCA AAATTGTGAA AAAGAAGGCG GATATGCAAG TAAGAGATAA GATATTGGTC ATGCTGGACT CTTGGCAGCA AGCTTTTGGG GGTCCTGAGG GAAAATATCC GCAATATTAT TGGGCATACG ATGAGTTAAG GCGCTCTGGA GTTGAATTCC CCCGGCGTTC ACCTGATGCG TCCCCTATAA TAACACCACC AGTGAGTCAT CCACCGTTAA GACAGCCTCA GGGGGGCTAT GGAGTACCTC CAGGTGGCTA TGGAGTACCT CAAGCTGGCT ATGGAGTACC TCAAGCTGGC TATGGAGTAC ATCAATCTGG TTATGGAGTA CCTCAAGCGG GTTATGGAAT ACCTCAAGCT GGCTATGGAG TACCTCAAGC GGGTTATGGA ATACCTCAAG TGGGTTATGG AATGCCCAGC GGTTCTTCGA GAAGGCTTGA TGAAGCAATG GCAACTGAGG TTGAGGGCTT AAGCTTGTCA AGTCTCGAGT CCATGAGGGA CGTGATGGAT CTCTTGAGCG ACATGCTACA AGCCGTGGAT CCCAGTGACC GTGCGGCTGT GAAAGATGAA GTCATTGTTG ACTTGGTCGA GCGTTGTCGT TCCAATCAGA AAAAGCTGAT GCAGATGCTA ACCTCCACTG GGGATGATGA ACTTTTAGGC CGAGGACTCG ATCTAAATGA CAGTCTTCAA ATTCTGCTAG CTAAGCATGA TGCAATAGCT TCTGGTTCTC CTCTGCCTGT TCAGGCTTCT GGTTCTCCTC TGTCAGTTCA GGCTTCAAAA CCTGCTGATT CGAGCCCCAA ATCTTCTGAA GCTAAAGATT CTAGTTCCAT AGCTGGTTCT AGTTCCCCAA TACCAGCCAC TGTTTCTACA GGGAAAAGCC CAATTGATGA GGAGTACGAA GATGAGGAAG ATGAGTTTGC GCAATTAGCT CGAAGGCATT CCAAACCGCC AGCATCTGTG ATTACAGACC CTACCAGTTC AGAGTCTCAT AATGCTGCAA GCAATGCTCT TGCTCTTGCT CTGCCTGACC CGCCTCCTCC AGTGAACACC ACAAAGGAAC AAGATATGAT TGACCTATTG AGTATCACAC TGTCTACACC ATCAACTCCA CCGCCTCCAT CCTCTCAGCC TTCTCCTCCT CCTCCCGCTG TCTCAGATCA AAACACCCAT ATCTATCCAC AGCCTCCGCC ACGGTTTGAT AGCTATGTCG CTCCTTGGGC ACAGCAACAG CAACCGCAAC CGCAACAGCC TCAAGCACAG CAGGGCTATT CTCAATATCA ACAACAACAG GGCTATTCTC AACTGCAACA GCCTCAACCA CAGCAGAGCT ATTCTCAATC GCAACCGCAA GCACAGGTCC AGATACAACC GTCAACTCGA CCTCAGAACC CGTATGAATA TCCGCCTCCG CCATGGGCTT CAACATCAGC AAATGCATAC TATACTCCAC GGGCTAATGC AAGTGCGTCA TACACAGACA CATCTGCCCT AGCCGGAAGA TCACTGCAGC AATCCAACTC ATTCCCCACA AGAGCTGGAG ATCCCCAGGC TACTTCAACT GCTAGCAACC CAGGTGTATC TGTAGGACAG AAGCCGTTTG TTCCATCATA CAGATTGTTT GAAGATCTGG ATGTGTTTGG GAGCGCAGAC GGGAAGAATA AGCCGACTAA TAGTAGTAAT GGTTCTCAAA GCTTGTCCGG GTCTCAGACG CAGCAGAGTA TGATAGGAGG AAGGAAAATG ATTTAA 
Length2016
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17688337.. 17691366
Download Sequence
A.thaliana
AGI-codeAT2G38410.1
DescriptionENTH/VHS/GAT family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg482295 hydroxyproline-rich glycoprotein family protein
2.82843 Ahg947489 Lung seven transmembrane receptor family protein
5.74456 Ahg946955 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
6.40312 Ahg918231 RNA-binding KH domain-containing protein
7.74597 Ahg495327 UDP-sugar pyrophosphorylase
8.12404 Ahg472400 Calcium-binding EF hand family protein
8.24621 Ahg486177 Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)
8.48528 Ahg324763
8.66025 Ahg471661 Protein of unknown function (DUF1423)
9.27362 Ahg487696 GC-rich sequence DNA-binding factor-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression