Detail



ID : Ahg480391

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480391|fgenesh2_kg.3__3092__AT2G15230.1
Sequence
TTTCAGATAG AAACAGTTCC GTCACCGGCG ACGATGAAAT GGTTGCTCGT CGCCGTATTG ACCGCTTTTA CGATCTTCTC CGCCGTAACA CAGTCCCATC TCCTCCATGG ATCTCCGGTC AATTCTCTCT GCGCTGATCT CATTCATCCC GCTAATTACT CCTGCACTGA ACACACTATT CAAACAAAGG ATAATTACAT ATTAGCTCTT CAACGTGTAG CTTCTCTTGG TCCAAGACTT CAATATGGTC CACCTGTTTT GCTTCAACAC GGATTATTTA TGGCTGGAGA TGTGTGGTTC TTGAATTCAC CAAAAGAGTC ACTAGGTTTC ATTCTTGCTG ATCATGGGTT TGATGTTTGG GTTGGAAATG TTCGTGGTAC ACGTTATAGT TATGGACATG TAACTTTGTC TGAAACTGAT AAGGAATTTT GGGACTGGAG TTGGCAAGAT TTGGCCATGT ATGACTTAGC AGAAATGATT CAGTATCTAT ATTCGATTTC AAACTCCAAA ATTTTCCTTG TTGGACATTC TCAGGGGACT ATCATGTCTT TTGCTGCTCT TACTCAGCCG CATGTTGCGG AAATGGTTGA AGCAGCTGCG TTGCTTTGTC CAATATCATA TTTGGATCAT GTTACAGCTC CACTTGTTGA AAGAATGGTT TTTATGCATC TCGATCAGAT GGTAGTTGCT CTTGGGCTGC ATCAAATAAA CTTTAGAAGT GATATGTTAG TTAAACTTGT TGATTCGTTA TGCGAAGGGC ATATGGATTG CACTGATTTC CTCACATCCA TAACAGGGAC GAATTGTTGT TTCAACGCCT CGAGGATAGA ATACTATCTA GATTACGAGC CTCACCCATC ATCTGTCAAG AATATACGAC ATCTTTTCCA AATGATTCGG AAGGGGACAT TTGCACAATA CGACTACGGG TATCTAAAAA ATCTACGGAT ATATGGGATG TCGAAACCTC CAGAATTCAA ACTCAACCTC ATCCCGGCAT CATTACCAAT GTGGATGGGG TATGGTGGAA CTGATGGTTT AGCAGATGTG ACAGATGTGG AACATACTCT CGCGGAACTA CCTTCCAGAC CAGAGTTACT TTATCTTGAG GATTATGGTC ACATTGACTT TGTGCTTGGC ACAAGTGCTA AAGAAGATGT CTATAAGCAC ATGATTCAAT TTTTCAGAGC AAGGAGAAAG TCTAGTAGTT GGTAAAATAC TCAATACACT GCTCTGCTTT GCACATATCT ATTTTCACGA AAATATATGT ACGCATCTGA TTGTAAATAT TTCCTTAATG GTCGAAATTT TATGTTTGAA AGAGCTACAT AGTACCAATC TAGATATGAA GAGATAGAAC AGTCCAGTGA GTGACTCGAG GTGAAATATA TTGGTCGTTG ATGAGTTTAG A 
Length1411
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18679373.. 18682037
Download Sequence
A.thaliana
AGI-codeAT2G15230.1
Descriptionlipase 1
TAIR curator summaryLipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.
Alias[ATLIP1][LIP1][lipase 1]
Gene coexpression
MR
MR Locus Description
22.7816 Ahg487008 Protein kinase superfamily protein
27.1109 Ahg484242 WRKY DNA-binding protein 3
33.8526 Ahg479059 lectin protein kinase family protein
35.8748 Ahg934176
38.3797 Ahg901375 EYES ABSENT homolog
46.6476 Ahg472924
48.8057 Ahg493041 receptor serine/threonine kinase, putative
50.5964 Ahg491805 Pyridoxal phosphate phosphatase-related protein
52.3832 Ahg496313 small G protein family protein / RhoGAP family protein
52.7162 Ahg488314
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression