| Annotation |
|---|
| Description | jgi|Araly1|480470|fgenesh2_kg.3__3171__AT2G20000.1 |
| Sequence |
AAGGCTAATG GATCTGTCAC GTGCGGAATT GTTTGAAAAC AGAGCATCGC ACGTGCCGCA TCAAAATTTG AAATCACGAC GACTTCAAAA AAAAAAAAAA AAAATAGTTG CAGAAAAAAC AGAAAACCCA CGTTTCTCTC TCTTCTCTCT CTCTCGAAGA AGAAAGGCAA CTATGGAAGC TATGCTTGTG GACTGTGTGA ACAACAGTCT TCGTCATTTT GTCTACAATA ATGCTATTTT CATGTGCGAG CGTCTCTGCG CTGAGTTTCC TTCTGAGGTT AATTTGCAGC TATTAGCCAC CAGCTACCTG CAGAATAATC AAGCTTACAG TGCATATCAT TTGCTAAAGG GAACACAAAT GGCTCAGTCC CGGTACTTGT TCGCGTTATC ATGCTTCCAG ATGGACCTTC TCAATGAAGC TGAATCTGCA CTCTGCCCTG TTAATGAACC TGGTGCGGAG ATCCCAAATG GTGCAGCTGG GCATTACCTT CTTGGACTTA TTTACAAGTA TACTGATAGA AGGAAGAATG CTGCTCAACA ATTTAAACAG TCTTTGACAA TAGACCCTCT ACTTTGGGCC GCATATGAGG AATTATGTAT ATTAGGTGCT GCTGAGGAAG CAACTGCGGT TTTTGGTGAA ACAGCTGCTC TCTCTATTCA AAAGCAGTAC ATGCAACAAC TGTCAACTTC CCTCGTCTTA AACACGTATA ATGAGGAACG TAATTCGACT TCTATTAAAA ACACGAGTTC TGAAGATTAT AGTCCCAGGC AGTCTAAACA CACACAAAAC CATGGCCTTA AAGATATCTC TGGAAATTTC CATTCTCATG GACTTAATGG AGGTGTTTCG AACATGTCAT TCTATAATAC TCCTTCACCA GTGGCTGCAC AGCTATCCGG TATAGCTCCA CCACCACTTT TCCGGAATTT TCAGCCAGCT GTTGCAAATC CAAACTCTCT TATTACTGAC AGTTCTCCAA AGTCCACAAT TAACTCTACT CTTCAAGCAC CCAGAAGAAA GTTTGTAGAT GAAGGAAAGT TACGTAAGAT TTCTGGCAGG CTATTTTCTG ATTCTGGTCC ACGACGGAGC TCAAGACTGT CTGCTGATTC AGGGGCAAAC ACTAATTCAA GTGTTGCAAC AGTAAGCGGA AATGTGAACA ACGCTTCCAA GTATTTGGGA GGTTCTAAAT TGAGTTCTTT GGCACTTCGT TCTGTAACAC TTCGGAAGGG ACACTCCTGG GCAAATGAAA ACATGGATGA AGGGGTCCGT GGGGAACCTT TTGATGATTC AAGGCCTAAT ACTGCCTCAA CGACTTCCAA TGATGCTAAA TCCTGTGATC AAGAAGATGA AACAATGTCG ATTGGTGGCA CAGCGATGAG TGCAAGAATC ACAATTGGTG TTTCGGAAAT TTTGAACCTC CTTAGGACAC TCGGAGAAGG GTGTAGACTT TCGTACATGT ACAGGTGTCA GGAGGCACTG GATACATATA TGAAACTCCC ACATAAGCAT TATAATACAG GATGGGTTCT ATCCCAGGTC GGGAAGGCAT ACTTTGAATT AATTGACTAT TTAGAAGCTG AAAAAGCATT CCGTCTTGCC CGCCAGGCTT CTCCTTATCG CTTAGAAGGA ATGGATATAT ACTCTACGGT CCTCTACCAT TTGAAGGAAG ATATGAAGCT GAGTTACTTG GCTCAGGAAC TAATATCAAC CGATCGCTTA GCCCCTCAAT CTTGGTGTGC TATGGGAAAT TGCTATAGCT TGCAAAAGGA CCATGAGACC GCACTGAAGA ATTTCCTACG AGCTGTTCAA CTGAATCCAA GATTTGCATA TGCACATACC CTATGTGGCC ACGAATACAC AACTCTTGAA GATTTTGAGA ACGGAATGAA AAGTTACCAA AACGCACTTC GTGTAGATAC AAGACACTAC AACGCATGGT ACGGGCTTGG AATGATATAT CTACGCCAAG AGAAGTTAGA GTTCTCAGAG CATCACTTCA GAATGGCTTT CCTAATAAAC CCGAGTTCAT CTGTTATAAT GTCTTATTTA GGGACATCTT TGCATGCCTT AAAGAAAAGT GAGGAAGCAC TAGAGATAAT GGAGCAAGCT ATAGTAGCAG ACAGAAAAAA CCCTCTTCCA ATGTACCAGA AAGCTAACAT ACTTGTCTGC TTAGAAAGAT TAGATGAAGC TCTAGAAGTT CTTGAGGAGC TCAAAGAGTA TGCGCCTTCA GAGAGCAGCG TTTACGCTTT AATGGGGAGG ATCTATAAGC GGCGAAACAT GCACGATAAG GCCATGCTTC ATTTCGGTCT AGCTTTGGAT ATGAAACCGC CTGCAACTGA CGTTGCTGCA ATAAAGGCTG CAATGGAGAA ATTGCATGTT CCAGATGAGA TCGACGAGAG CCCATGAAAC CATTGATGCT CCAAGAACCT TGGTATGAAT TAATATGAAA CCGTTGCTGC TCCACGAACC ATGGGTATGA AATATTTGTG CAAAGCCTAC CTCTTTTAGG GAACTAGTTG GGTCTTAAAT CTCTTTGGTA CCAAAACCGT AACACAGCCA CAAGAACTTA CCACATGACT TGAGTATGTA TCATGAGTTG ATCTGTATGT TGTCCATAAC TACTTATTCG CAATATATAA ATTTACCACA T |
| Length | 2651 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 19597584.. 19602795 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G20000.1 |
| Description | CDC27 family protein |
| TAIR curator summary | Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap. |
| Alias | [CDC27b][HBT][HOBBIT] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg483227 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related |
| 6.48074 |
Ahg925609 | IBR domain-containing protein |
| 8 |
Ahg475901 | Golgi transport complex protein-related |
| 11.4018 |
Ahg947666 | |
| 12.1244 |
Ahg921879 | VQ motif-containing protein |
| 16.2481 |
Ahg476570 | RING/U-box superfamily protein |
| 17.0294 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 17.0294 |
Ahg492627 | SWIB complex BAF60b domain-containing protein |
| 18.4391 |
Ahg482183 | Protein of unknown function (DUF1068) |
| 19.799 |
Ahg491303 | tRNA synthetase class II (D, K and N) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
|
| Growth Chamber expression |
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