| Annotation |
|---|
| Description | jgi|Araly1|483227|fgenesh2_kg.4__2287__AT2G41500.1 |
| Sequence |
TTCTCGCTTC AATTTTCCGT TTTTGCTACC GTCGTCTCTG GAGACTGGAG AGGAAACACG GCGCTTGAGC AACTGACAAG TCTGTTTCGT GTTTGGGGTT TTCGAAGAGA GTAACGAGAT TCGCGGATTT CGTCAATTCC TGGGTTTTCT CTAGATTGCT GTTTCGGTGG TGTTTTTTTT CTGAGGATTT AAGCGAACAT GGAACCCAAT AAGGAAGATA ATGTTTTATT ACCAGCAACA GCTCAAATCA CAGCACCTCC AATTCTACAA GATGCCACGT CTCAGCCAGG TTTCTCTGCC ATACCACCGG TGGTTCCCCC ACCAATGGCT CCAATACCAA TGATGCCACA TCCTCCAGTT ACCCGCCCAC CTACTTTTAA GCCACCTGTT TCACAAAATG GTAGAGCGAA AACCAGTGAC TCGGATTCGG AATCAGATGA TGAACATTTT GAGATATCTG AGGAGAGTAG GCAGGTCAGA GAAAGACAGG AAAAGGCATT GCAAGACTTG TTGGTAAAGC GTCGTGCTGC TGCTATGGCA GTTCCAACAA ATGACAAAGC TGTTAGGGAT CGCCTTAGAC GACTTGGGCA GCCCATTACT CTATTTGGAG AACAGGAAAT GGAGAGAAGA GCTAGGTTGA CTCAGCTTTT GGCTAGGCTT GATATGGATG GGCAACTGGA TAAACTGCTT ATAGCTCAAG AAGAAGATGT GGCTCCAAAA GAGGAAGTGG ATGATGAAGT ACTTGAATAC CCCTTTTTTA CCGAGGGTCC AAAGGAACTT AGAGAGGCTA GAATAGAAAT TGCCAAGTTT TCTGTCAAGA GAGCTGCTGT CAGGATTCAG CGTGCAAAGC GGCGGAGGGA TGATCCAGAT GAAGATATGG ATGCAGAGAC TAAGTGGGCT TTAAAGCATG CTAAAAACAT GGTCCTTGAT TGCAGTAATT TTGGAGATGA TCGTCCTCTT ACCGGCTGCT CCTTCTCACG CGATGGAAAG ATACTTGCCA CATGTTCTCT GAGTGGAGTT ACTAAATTGT GGGAGATGCC TCAAGTTACA AACACGATTG CTGTCTTGAA GGATCACAAA GAACGTGCTA CTGATGTAGT GTTCTCCCCT GTGGATGATT GTCTAGCAAC TGCTTCTGCT GATCGAACTG CAAAGCTGTG GAAAACTGAT GGAACACTCC TACAAACGTT TGAAGGTCAT TTGGATCGCC TTGCACGTGT TGCTTTCCAC CCATCAGGGA AATACTTGGG AACTACAAGC TTTGACAAGA CGTGGAGATT GTGGGATATA AACACAGGAG CTGAACTGCT TTTGCAAGAA GGTCATAGTC GTAGTGTCTA TGGGATTGCA TTTCAACAAG ATGGAGCATT AGCAGCTTCT TCTGGGCTTG ATTCACTTGC ACGAGTTTGG GATCTCCGCA CTGGTAGGAG TATTCTTGTC TTCCAAGGAC ACATCAAACC GGTAAGATTC TCAGTGAATT TCTCTCCTAA TGGTTATCAC TTGGCATCTG GTGGTGAGGA TAATCAATGC CGTATTTGGG ATCTAAGAAT GAGAAAGTCA TTGTACATTA TACCAGCTCA TGCCAACCTT GTGTCTCAAG TGAAGTATGA ACCACAAGAA GGCTACTTTC TGGCCACTGC ATCATACGAC ATGAAAGTCA ATATATGGTC AGGAAGAGAT TTCTCGCTCG TTAAAAGCTT AGCAGGGCAT GAGTCAAAAG TCGCCTCTCT AGATATCACT GCAGATAGCT CGTGTATTGC AACTGTATCA CATGATCGCA CCATCAAGCT CTGGACAAGC AGTGGAAATG ATGAAGATGA AGAGAAAGAG AAAGAAACAA TGGACATAGA TCTCTAGTTT CATTTTTCAT GTTTGTGCAA GAAAAAAAAA TTAGCTTGTT AGAGAGAATC ATTAAACGGT ATTGATATCT TGTCGGGAAT TATAGAAACT CAGGATGATG ATACATTGTC TTTGAAAATT TTGCCATTTC GTTCAACAAA AA |
| Length | 2002 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19200839.. 19204130 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G41500.1 |
| Description | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related |
| TAIR curator summary | Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells. |
| Alias | [EMB2776][LIS][LACHESIS] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg496142 | nuclear RNA polymerase C1 |
| 3.4641 |
Ahg919955 | Protein kinase superfamily protein |
| 3.74166 |
Ahg480470 | CDC27 family protein |
| 4.89898 |
Ahg480649 | high mobility group B4 |
| 7.2111 |
Ahg943680 | UBX domain-containing protein |
| 7.34847 |
Ahg474570 | DEA(D/H)-box RNA helicase family protein |
| 9.16515 |
Ahg488797 | GPI transamidase component family protein / Gaa1-like family protein |
| 9.59166 |
Ahg894371 | double-stranded DNA binding |
| 12.4499 |
Ahg948689 | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) |
| 14.4222 |
Ahg941614 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|