Detail



ID : Ahg480518

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480518|fgenesh2_kg.3__3219__AT2G19540.1
Sequence
ATCCTAAATT GATCATCGTC CTCCTTTAGA GTTATTTAGA AAATCAGAAA GACCAAAATG GGCCGCACCG TGAAAACCAA GGCAAAGAGG AAGAACAAGA AGAAGGCAGA GGCGTCTTCT TCCGAGATAC CTTCGATACC AACTAGGGTT TGGCAACCAG GTGTTGATAC CCTTGAAGAT GGAGAAGAAC TTCAGTGTGA CCCTTCTGCT TATAATTCTC TCCATGGCTT TCATGTTGGT TGGCCTTGTT TGAGTTTTGA CATTTTAGGT GATAAGTTGG GTTTGAACCG AACTGAGTTT CCTCACACAC TTTATATGGT GGCTGGGACT CAGGCTGAGA AAGCAGCTCA TAACTCCATA GGGTTATTTA AAATCACCAA CGTATCTGGT AAGAGACGTG ATGTTGTGCC TAAGACATTA GCGAATGGTG ATGATATGGA GGATGAGGAT GATGATGATG ACAGTGACAG CGATGACGAT GAAGGAGATG AAGCTTCCAA AACTCCTAAT ATTCAGGTTC GCAGGGTTGC TCACCATGGA TGTGTTAACC GTATACGTGC AATGCCACAA AATTCTCATA TCTGTGTCTC TTGGGCAGAT TCTGGTCATG TACAGGTCTG GGACATGAGC TCTCATCTTA ATGCTTTAGC CGAATCAGAA ACAGAAGGTA AAGATGGAAC TTCACCGGTT CTTAACCAAG CACCCTTAGT AAACTTTTCT GGCCACAAAG ATGAAGGCTA TGCTATAGAT TGGAGTCCTG CAACCGCTGG AAGACTTCTT TCCGGGGACT GCAAGAGTAT GATTCACTTA TGGGAGCCAG CTTCTGGTTC ATGGGCTGTT GATCCTATTC CGTTCGCTGG ACACACTGCA AGTGTTGAAG ATTTACAATG GAGTCCAGCC GAAGAAAACG TGTTTGCTTC ATGTTCTGTG GATGGGAGTG TTGCAGTATG GGATATCCGT CTTGGGAAGT CGCCTGCACT ATCTTTCAAG GCACATAACG CAGATGTGAA TGTCATCTCA TGGAACAGGC TGGCTAGTTG CATGTTGGCC TCAGGAAGTG ATGACGGGAC ATTCTCCATC CGTGATCTTA GACTGATCAA AGGTGGAGAT GCAGTGGTAG CACATTTTGA GTACCATAAG CACCCTATCA CTTCAATTGA ATGGAGCGCT CATGAAGCTT CGACACTTGC AGTCACTTCC GGTGATAACC AGCTCACGAT ATGGGATCTA TCCTTAGAGA AGGATGAAGA AGAAGAGGCA GAGTTCAAGG CACAGACCAA GGAACTAGTC AACACACCTC AAGACTTGCC TCCCCAGCTT CTCTTTGTTC ACCAAGGACA AAAGGATCTG AAGGAACTTC ACTGGCACAA CCAGATTCCG GGGATGATCA TCTCAACTGC TGCTGATGGT TTCAACATCC TAATGCCTTA CAACATTCAG AACACACTTC CGTCTGAGCT ACCAGCCTGA AAGACGGGGT CTTTCTCTGA AAACTCTTGA AGTACTACTC ATAGTTTGTA CTGTCCTCTC TCTGTTCTCT TTCATTGTAT CATTGATAGC AAGTTTCAAG AATTATTATA CTCTTTCACA ACTTTGAAGT TTTCATCATC AGTTTATTGA TTTCAGTTGT GACAAAATGT CAATTTTTGA 
Length1650
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT2G19540.1
DescriptionTransducin family protein / WD-40 repeat family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg493903 prohibitin 3
6.16441 Ahg489610 NOP56-like pre RNA processing ribonucleoprotein
6.48074 Ahg471749 Tetratricopeptide repeat (TPR)-like superfamily protein
8.7178 Ahg494878
11.4018 Ahg474659 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
15.9687 Ahg484880 histone deacetylase 3
17.9444 Ahg895780 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
18.9737 Ahg477335 Ribosomal protein L13 family protein
19.6723 Ahg909999 GTP binding Elongation factor Tu family protein
19.8494 Ahg949105 Glutathione S-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression