| Annotation |
|---|
| Description | jgi|Araly1|489610|fgenesh2_kg.6__2744__AT5G27120.1 |
| Sequence |
GCGGCTCCTG ATTTTAGCTC TCTCTAACGC TGCAGCTGTG CGTAAACCCT TTGAGGAGCT TGTGAAAATG CACATACTGT TTGAGACGCC AGGTGGTTTT GCAATCTTTA AAGTATTAGA TGAAGGAAAG CTCTCTAATG TTGAGGATAT CGGTAATGAG TTCTTGACCG CAAAGTCAGC CCGAAAGATG GTTAAGCTAG TAGCTTTTGA CAAGTTTGAC AACACAGCTG AAGCTCTTGA AGCAGTGGCT AAATTGCTTG AGGGAACTCC AAGCAAGGGT CTACGCAAGT TCTTGAAGGC TAACTGTGTT GGTGAAACCT TGGCTGTTGC TGATTCTAAG CTTGGAAATA TCATCAAGGA GAAACTGAAA ATAGACTGTG TTCACAACAA TGCTGTTATG GAGCTGTTAC GAGGTGTTAG AAGCCAGCTA AGTGAACTTA TATCTGGATT GGGAGATAAA GATCTAGCTC CAATGAGCTT GGGGTTGTCT CACAGCCTTG CCAGATATAA ACTAAAGTTC AGTACCGACA AGGTGGATAC TATGATAATC CAAGCTATTG GTCTGCTTGA TGATCTTGAC AAAGAGCTCA ACACGTACGC TATGAGGGTT CGTGAATGGT ATGGTTGGCA TTTTCCTGAG CTTGCTAAGA TCGTACAGGA CAATATCTTA TATGCCAAGG CTGTTAAACT TATGGGGAAT CGGGTTAATG CTGCAAAGCT AGACTTCTCT GAGATATTGG CTGATGAAGT TGAAGCAGAA CTGAAAGAGG CTGCTGTGAT ATCTATGGGA ACTGAAGTAA GCGACCTTGA TTTATTGCAC ATCCGAGAAC TCTGTGACCA GGTTCTTTCT CTTGCTGAGT ACAGAGCTCA GCTTTTTGAC TACTTGAAGA GCAGAATGAA CACAATTGCA CCAAATCTTT CTGCCCTTGT CGGGGAGCTA GTCGGTGCTC GCTTAATATC TCATGGTGGT AGTTTGTTGA ACCTGGCAAA GCAACCTGGA AGCACAATTC AGATTCTTGG AGCTGAAAAA GCCTTATTTA GAGCCCTTAA GACCAAGCAC GCCACTCCAA AGTATGGTCT ACTTTACCAC GCATCTGTGG TTTGCCAAAC TACACCAAAG AACAAGGGTA AAATTTCACG GTCATTAGCT GCAAAAGCTG TTCTTGCTAT CCGTTGTGAT GCCCTTGGTG ATGGCCAAGA CAACACTATG GGAGTGGAAA ACCGCTTAAA GCTTGAAGCA CGGTTGAGAA CTCTCGAAGG AAAAGATTTA GGACGTCTGT CTGGCTCAGC TAAAGGCAAA CCAAAGATTG AAGTTTATGA CAAAGATAAA AAGAAAGGAT CCGGAGGTCT GATCACTCCT GCTAAGACTT ACAACACAGC TGCAGACTCT CTTCTTCAAA CTCCCACAGT GGATTCAGAG AACGGTGTCA AAGAGAAGAA AGACAAAAAG AAGAAGAAGA AGAAGGCTGA TGATGAGGAA GAACCCAAAA CTGAGGAGCC TTCGAAGAAG AAGTCGAAGA AGAAGAAAAC AAAAGCAGAA CCTGAAACCG CCGAAGAGCC TGCAAAGAAG GAGAAAAAGA AGAGAAAACA CGAGGAAGAG GAAACCGAAA TGCCTGCTAA GAAGAAGGAA AAGAGTGAGA AGAAGAAGAA GAAAACTGAG GTCTGAGGAG AGAGTTAAAA ATTTTGCGTG GTCTAGTTTC TCTACGTTGT TATCAGAAAC AAAGCAAATC TTTTGTTGCG TTAGGTGTTA AGTAAGGTTT TTTTTTT |
| Length | 1767 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 12482790.. 12485583 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G27120.1 |
| Description | NOP56-like pre RNA processing ribonucleoprotein |
| TAIR curator summary | SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg492297 | FK506 BINDING PROTEIN 53 |
| 5.56776 |
Ahg486159 | homologue of NAP57 |
| 6.16441 |
Ahg480518 | Transducin family protein / WD-40 repeat family protein |
| 8.544 |
Ahg354097 | |
| 8.94427 |
Ahg474037 | nucleolin like 1 |
| 9 |
Ahg928085 | NOP56-like pre RNA processing ribonucleoprotein |
| 9.74679 |
Ahg478926 | cobalt ion binding |
| 12.3288 |
Ahg471063 | Translation elongation factor EF1B, gamma chain |
| 12.8062 |
Ahg496951 | |
| 13.4907 |
Ahg479365 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|