Detail



ID : Ahg480667

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480667|fgenesh2_kg.3__3368__AT2G17720.1
Sequence
AGAAGACAAA GAAGAAGAGA ATCAATCACA CAAGAAAAAT TATAATCCTT CTTAATTCTT ATTATATATA AATAAACTTC AATCTAAGCT TCGTCGTAAT TTCTCTTCCG TTCAATGTTG TTCTTTTAGA TCTCGAACAA AACAAAATCT CCAGAAAAAA AAAAAATCAA TTTCCATGGC GTCTAAATCG AAGCAACATC TTCGTTATCA GCCACGGAAA TCTGTGTCAC GATCAACACA AGCTTTCACA GTGCTTATTC TTCTACTTGT AGTGATTCTG ATTCTTCTGG GTCTCGGGAT TTTGTCACTA CCTAATGCTA ATAGAAACTC TTCGAAGACG AATGATTTGA CCAACATTGT ACGGAAGAGT GAGACGAGTG ATGGAGATGA AGATGGGAAT GGTGAGCGTT GGGTTGAAGT GATTTCTTGG GAGCCTCGAG CTGTTGTTTA TCACAATTTC TTGACCAATG AAGAATGTGA GCACTTGATC AATCTTGCTA AACCGAACAT GGTTAAGTCA ACCGTGGTTG ATGAGAAAAC CGGTGGTAGC AAAGATAGCA GAGTAAGAAC TAGCTCAGGA ACTTTCCTTA GAAGAGGACA TGACGAAGTT GTTGAGGTGA TTGAGAAAAG GATTTCAGAT TTCACATTCA TTCCTGTTGA AAATGGAGAA GGTCTTCAAG TTCTTCACTA CCAAGTTGGG CAGAAGTACG AGCCTCACTA TGACTATTTC TTAGATGAGT TCAACACCAA GAACGGAGGA CAACGAATAG CTACTGTGCT TATGTACCTC TCGGATGTCG ATGATGGTGG CGAGACTGTG TTCCCTGCAG CAAGAGGAAA CATTAGTGCA GTCCCATGGT GGAACGAGCT CTCAAAATGT GGTAAAGAAG GACTATCTGT TCTACCAAAG AAGCGAGATG CTTTACTTTT CTGGAACATG AGGCCTGATG CCTCTCTAGA CCCTTCGAGT TTGCACGGTG GATGTCCAGT GGTGAAAGGA AACAAATGGT CATCCACGAA ATGGTTCCAT GTCCACGAGT TCAAGGTTTA AGAACCAAAC ACAGAAAAAA AAAACTAAAA TTTGAGGGTT TTCACGGAAG CTTCAAATTT GTGTGGATAC AAATAAACAG ATGTACGATG TGTTTCCCTT TTGAAGTGAG AGATCCTTAG GAAATTGGAG GCTGTTTTTC CTTAGGGATA TTTGAACTTT TTCTTTTAAA CTATTTGTAC TTTACGACAT GTTCGGATCT GAGTTTTTGT AACTTTAACA ACTCAATACA ACCATGCATT TTCCGTTTA 
Length1299
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20966707.. 20968902
Download Sequence
A.thaliana
AGI-codeAT2G17720.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias[P4H5][prolyl 4-hydroxylase 5]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg491084 phosphoserine aminotransferase
6.48074 Ahg357601 cytochrome B5 isoform E
8.30662 Ahg485868 tryptophan synthase alpha chain
14.2829 Ahg951371 RAB GTPase homolog A4A
14.9666 Ahg483096 Staphylococcal nuclease homologue
17.3205 Ahg489590 glutathione synthetase 2
17.8885 Ahg490610 Protein of unknown function (DUF616)
30.1662 Ahg926455 Ribose 5-phosphate isomerase, type A protein
33.6749 Ahg476840 eukaryotic translation initiation factor 2 (eIF-2) family protein
36.524 Ahg919186 lipid-binding serum glycoprotein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression