Detail



ID : Ahg926455

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926455|scaffold_202016.1
Sequence
TCACAAAGCA AGCCGCGTAC AATGGGTTCT GCTTTCGATC CCTTTGTCAC GGCCACTGAG GATTCCGCCG TCGTCAACTC GCCGGCGCCT CTCTCAAACC TCAGTCAAGA AGAACTCAAG AAAATCGCCG CTTATAAAGC CGTCGAATTC GTCGAATCTG GAATGGTCAT CGGTCTCGGC ACTGGCTCCA CCGCTAAACA CGCCGTGGCT CGTATCAGCG AGCTTCTCCA AGAAGGAAAA CTCAAGGATA TAATCGGAAT CCCGACTTCA ACCACAACGC ATGAGCAAGC GGTGTCTCTA GGGATACCGT TATCCGATCT AGATTCGCAT CCGGTGGTGG ATCTATCAAT CGATGGCGCC GACGAAGTCG ATCCGGCTCT CAATCTGGTG AAAGGACGCG GCGGATCGTT ATTGAGGGAG AAGATGATAG AAGGAGCATC TAAAAAGTTC GTTGTGATTG TTGATGAATC GAAGCTTGTG AAGTATATCG GAGGAAGCGG ACTCGCTGTT CCGGTGGAGG TTGTTCCGTT CTGCTGCGAT TTCACACGGG GGAAATTGGA AGAGCTTTTC AGAGAATCGG GATGCGTTGC GAAGCTTAGG ATGAAGATCG GATCTAACGG CGGAGATGCG ACGCCGGCTG TGACGGATAA TGGAAATTAT GTGGTGGATT TGTATTTGGA GAGAGATATT GGAGATTTAG AGGCGGCGAG TGAGAAGATA TTGAGGTTTC CTGGAGTAGT GGAGCATGGG ATGTTTCTGG GAATGGCGAC GACGTTGATC GTCGCCGGGA AATTCGGTGT AACCGTCAAG GATAGGTTTG GATAAAAGAG TCATTTGAAA AATTAG 
Length846
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13915139.. 13915984
Download Sequence
A.thaliana
AGI-codeAT1G71100.1
DescriptionRibose 5-phosphate isomerase, type A protein
TAIR curator summaryEncodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.
Alias[RSW10][RADIAL SWELLING 10]
Gene coexpression
MR
MR Locus Description
12.49 Ahg479509 RING/U-box superfamily protein
25.0599 Ahg485812 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
30.1662 Ahg480667 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
32.0312 Ahg480060 MATE efflux family protein
32.9848 Ahg934879 Protein kinase family protein with ARM repeat domain
36.5513 Ahg322706 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
36.7423 Ahg488169 ADP/ATP carrier 2
52.1536 Ahg327563 senescence-associated gene 21
54.111 Ahg476856 Target of Myb protein 1
57.8965 Ahg494254 ethylene responsive element binding factor 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression