Detail



ID : Ahg480670

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480670|fgenesh2_kg.3__3371__AT2G17760.1
Sequence
CTTTTGCCTA ATTTCTCGGT TTCATTTACA AAATTCTCAT TTTGATTCTT TCTTACTCTT TAGCTAGAGA AGATTTATAC TGGGTTTTGA GTATTTCTCG GAAAGTTTCG TTTTTTTTTT TTCTGGGAAA GTTTCCGAGA TCTCGGCGGA GTACTTTTTT TGACGACGAA CCAGTATGGT TTGGTACTCA AGCTGGAGAA TTTTGTTTCT GGGTCTGCTT ATTTTGCTAG CTTCGAGCTG GGTTTTGGAA AGATGCGAAG GATTTGGTGA ATTTGGGTTT GAATTTCATC ATCGTTTCTC CGATCAGGTT GTTGGGGTTT TACCTGGAGA TGGTTTACCT AATCGAGATT CTTCTAAGTA TTATAGAGTG ATGGCTCATC GTGATCGGTT AATCAGAGGT CGTCGACTTG CAAACGAAGA TCAATCACTT GTTACTTTCT CTGACGGCAA CGAAACTATT CGTGTTGATG CCCTAGGATT TTTGCATTAT GCTAATGTGA CGGTTGGGAC GCCGTCTGAT TGGTTTCTGG TTGCTTTAGA TACTGGAAGT GACTTGTTTT GGTTGCCCTG TGACTGCACC AATTGTGTTC GTGAATTGAA AGCACCTGGT GGCTCGAGTT TGGACCTCAA TATTTATAGC CCTAATGCAT CATCGACAAG TACTAAAGTT CCTTGTAATA GCACATTATG TACAAGAGGT GATCAATGCG CTTCCCCTGA AAGTAATTGC CCATACCAGA TCCGGTATCT TTCTAATGGT ACCTCGTCTA CCGGAGTCTT GGTGGAGGAT GTACTTCACT TAGTTTCAAA TGACAAAAGT TCCAAAGCTA TTCCAGCTCG AGTTACTTTG GGATGTGGTC AAGTTCAGAC TGGTGTATTC CATGATGGTG CAGCTCCAAA TGGTCTTTTC GGGCTTGGCT TAGAAGACAT ATCGGTTCCT AGCGTACTAG CAAAAGAAGG AATTGCAGCT AACTCATTCT CAATGTGTTT TGGGAACGAT GGAGCTGGTA GGATCAGTTT TGGGGATAAA GGTAGCGTAG ACCAGCGGGA AACACCATTG AACATAAGAC AACCACATCC TACTTACAAT ATCACCATCA CTAAAATAAG CGTTGGAGGA AATACCGGCG ATCTTGAATT TGATGCTGTT TTCGACTCTG GAACCTCGTT CACTTATCTG ACTGATGCGG CTTACACCCT TATTTCAGAA AGCTTTAATT CTCTAGCTCT GGACAAACGT TATCAAACAA CTGATTCCGA GTTACCTTTT GAGTACTGTT ATGCATTAAG CCCAAACAAA GACAGCTTCC AGTATCCAGC TGTGAATCTG ACAATGAAAG GCGGGAGCTC ATATCCCGTT TATCACCCGT TAGTAGTAAT CCCCATGAAG GACACAGATG TCTACTGTTT AGCCATCTTG AAGATAGAAG ACATTAGCAT CATTGGACAG AATTTCATGA CTGGCTATCG CGTTGTCTTT GATCGTGAGA AACTGATTCT GGGGTGGAAA GAATCTGATT GTTACACCGG TGAGACCTCG GCTCGGACGC TTCCATCGAA CCGTTCCTCC TCCTCGGCTA GACCGCCAGC TTCTTCGTTT GACCCAGAGG CGACAAACAT ACCATCTCAA AGACCAAACA CGTCGACTTC TTCTGCTGCT TATTCTCTCT CTATCTCACT TTCATTGTTC TTCTTCTCAA TTTTGGCCAT CCTTTAATTA TTACACGTAT ATATTTAGCC ATGAATTTGT ATTCTTTAGA AGATTATTGG GTTCAATCAC CAAAAAATAT TGCACACTAC AGTTGTATTT TTTTTTTCTA TGTTGTATAT GATATTTAAT TTTTAACAAT TATATATTAG TTATTTGGTG AAGTTTTGTT GTAGAT 
Length1886
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20986540.. 20989659
Download Sequence
A.thaliana
AGI-codeAT2G17760.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.0238 Ahg322706 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
27.7669 Ahg486427 diphthamide synthesis DPH2 family protein
28 Ahg487900 RING/U-box superfamily protein
34.2053 Ahg476142 Sterile alpha motif (SAM) domain-containing protein
35.4965 Ahg901520 Modifier of rudimentary (Mod(r)) protein
36.6606 Ahg316232 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
36.6606 Ahg939419 Galactose oxidase/kelch repeat superfamily protein
37.229 Ahg486058 Ca-2+ dependent nuclease
38.0263 Ahg473000 dihydrosphingosine phosphate lyase
39.7492 Ahg478119 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression