Detail



ID : Ahg481048

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481048|fgenesh2_kg.4__108__AT2G21860.1
Sequence
ATGGCGATTT CTATCAAAGC TCCTTCTCTT TCGGGAACGA GAGAGTCTTC TTCCTTCCTT AACCGGTTTG TCACTCGTCA ACCGGATTTT GCTACGGTTA AATTCTACCG GAAGCCTCGT CTTGCTTTGA ATGACAAATC GTTCTCCATT GTTCGCTCGG TTTTGGAGAC TGAGAAGAGT ACGAAGATAG AGAATCCTGA GCCTCCGGTG AAATTGATTT CTCTCGTCGG TAAAGGAACA CTAAGCCCAC TCAAATCCAC CTCCTGGGAA GATGTTATGC TCCACACTGC GAGAAGATTG AAATGGGTTG ATGAAGGATA TGAAATGCTC GTCTTTGATG ATGAAATTCT GAGTTCAAAT GATCAGAGAG CTTTGAATCT GAAACAGGAA CTGAATCAGA CTGATATCTT GGTTGTTGTT GCTGTTAATA ACTCAGAATC TGTGAATTGG ATTTTGACTA ACAGCAGAAA TGTCAAGAAC ATGATTTGCT TTGAGTCTTC TTCAAATTTG ATGAACAGGC TTGGAGGGAC TGATATTGGA AGTGTGAATC AAGATAAACA AGTAACAGAG GTTGTGAAGA CTGTAGGAGA TGCTTGGGAA CGTCGTAATT CTGATGATAT AAGGTTTTGT TTGCTTGTGA TTATCAATGC TTATATAAGA CCAGTTCCTG TGTTGCAGAA CTTGAGGTCC AAAGGGTTTT CTACCCTTAC TTGTATGGTT AAAAACTGTG GACCTCAGAT TTTGAACTGT CTTTTGGATC CGAATTGTCG AAAAGCTCTT CAGTGTTTGA ACCAATGTAG TCCTGTGGAT CAGGTGTGTA GCTACAGATG CATTGCTTCT TATGAGAGTC CTTACTTTGA AGCATTCTCT CTTTGTGTAC TACAGAAACA CAATTGTTTA GAATTGGATG CAAAGATCCC TGAGAAGCCT TATGTGCCTC CCATGACGAG TTTTCGAGGG AAGGAGTTGT GTCATGATAC AGCAGAAGAC TTGTTTGTTG GATGGTTAGG GGAATTGGAT TGGAGCTGGC GTGTCGTGGC TGGACAAAAC CCGGCTTATG ATCAGTTTCC ATGTCAGTAC CAGCTTTTCT ACAGAGGGAA AGGGAAGTCG GCTTTTTGGT ATGAACCCGT GTTTCAGGTC AGAACGCTTG AAGAGAAGCT AGTGTGGAGA AGGAGGAGAT ACTCGGTTAA GAGAGGAAAG ATCCCTGCAA CATTTCGTTT CAGCGTTTTG GACAATGGTG TGGTGTCGAA TGAGTTTTGG ACTATTGTTG ATGTATCTGA TGATCTAAGT TGGGGACTGT TCCATTACAA TGGAGCGGCT CGTGTTGCAG GACAGTCTTA CACCGGGGCT GTGCTCGTGA CACCGGATGG TTCCTACCCG GCAGAGAAGG AAAAGGAGAG ATTGAAGTCT GCATTGGAGA AATGTGGGAT TAAGGAGTGG GAACTCTTTA CTGTTGACAA TTGTTCTTGC GAAAATCCGC CATTGGGGAT TCCACAAGGC TCTAGACTAC ATTCGAGAAT CAGTATCATA GAGGAACCAG ACTCGGAAGA AAAATTCAAC TAATTTTGCA TGTAAATTCA TGTTTCTTTA TGAATATCAT TGAATCCAAT ATTGAGT 
Length1617
Protein Sequence
Protein Residue
Map Locationscaffold_4: 496100.. 497850
Download Sequence
A.thaliana
AGI-codeAT2G21860.1
Descriptionviolaxanthin de-epoxidase-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg470691 NAD(P)-linked oxidoreductase superfamily protein
6 Ahg484287 Translin family protein
8.3666 Ahg484790 Phosphoinositide phosphatase family protein
19.8997 Ahg919661 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
21.5407 Ahg477583 LUC7 related protein
22.0454 Ahg480695 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
38.8587 Ahg940781 Protein kinase superfamily protein
41.7612 Ahg924211 Esterase/lipase/thioesterase family protein
41.821 Ahg949776 phosphoprotein phosphatase inhibitors
50.1996 Ahg472501 Phosphoinositide phosphatase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression