Detail



ID : Ahg480695

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480695|fgenesh2_kg.3__3396__AT2G17970.1
Sequence
ACACTGACAA AAGAGTACTC GATTCCAAAT CGTGGACTAA GAAATTTTGA ATTTTCTGTA ACAAGAGGAT TAGATTCGAT TGAATCGAGC GAATCAAATG GAAGACGATT CATTTCTCCG GCAGTACCAG CCGTCGGAAC TTAAGATCGT TTCGGAATTT CTGACGAATT GGCTTCCTTT CTTATCTAAA GATCTATGCG AGGACTGTAA TCACCTTCTC TCCAATCGAA TCCGTTCTCT TGACCCAGGA CATTGTAGTA ACACAGATAA AGTTGATGGA GAGTGTAAAA CTGGTTCTGG TTCGGTGGTG GGAACTATGG GATCAGAAAG AGTTAGTAAC AGTGTGGATG GTAAGTCGGA AAAGGGCGAA GACTGTGATA ATCATTCGTT AGGTGGTTGG AAGGAGAGTG AAATTGTATT TGGTTCCATT TCTGAAGTTT TAGGTAGTGT ACTGCCCTCT AGACCAGCTG TTGTTGAAAC AGCAAGCCCT CGGATGTCTT GGGCTGATAT GACACAAGAG GATGATGAGT TCGACGAGGA GGAGGAGGAG GAAGAGCAGA GGGATTCGAG TAGGAAAGGT TTTGATGCGA GTTCGATGAG GACTCCAGAG AAGCCTAAGT TGTCTAGAGA TCAGAGAGAG AATCTTAGGC TGATGAATGT GAAGAGAAAG AAAGACTTCA TTTGTTTGGA GAGAGTTAAG GGAAAGATCG TTAATGTGCT TGATGGACTT GAGTTGCACA CTGGTGTTTT TAGCGCTGTG GAGCAGAAAC GGATTGTTGA TCAAGTGTAT CAACTTCAAG AGAAGGGACG AAAAGGAGAA CTTAAAAAGC GTACATTTAC TGCTCCACAT AAGTGGATGA GAGGCAAAGG ACGTGAGACT ATACAATTTG GCTGTTGTTA CAACTACGCT CCAGACAGAG CTGGAAACCC ACCGGGTATC CTTCAACGTG AAGAAGTGGA TCCATTACCT CCTCTTTTCA AAGTAATCAT AAGAAGGTTG ATTAAATGGC ATGTACTGCC TCCAACTTGT GTGCCCGATA GCTGCATTGT AAACATCTAT GATGAAGGTG ACTGCATACC TCCGCACATC GACAACCATG ACTTTCTGCG TCCGTTCTGC ACCATCTCTT TCCTCAGTGA ATGCGATATC CTCTTTGGCT CAAACCTGAA TGTTGAGGGT CCTGGTGAAT TCTCGGGTTC ATACTCAATA CCGCTTCCTG TGGGATCAGT TCTGGTGTTA AATGGAAATG GAGCTGATGT AGCTAAGCAC TGTGTACCTG CAGTTCCCAC AAAAAGGATA TCAATCACAT TTAGGAAAAT GGATGAGTCA AAACGCCCGG TTTGGTTCAC CCCAGAGCCT GATTTGCAAG GGATCGAGCC ATTGCCATTG GAGCTGAACC GCTCTGGTTC TGCTTCAAGG TCCTCAGGAT TTAACAACCA TAACAGCACT AACCGAAGAG GACATGGACG TAGACGAGGA GGCAATAGTT ATGAGTCAAG AGGTTACTAT AATCCTGAGA GAAGCAGTGA ACAGAATGAC TCTGGAGACT GGCCATCAAG CCAGAGAAGA GGAATGCCAC GTCCTAGTAG AAGAAACTAA GGTTAAATTC TTCTACTTCT GAAGCTGAAA TTTATAGGTT CTTTCTTTAT TTAACCAATT TTCCATATTA TTAATTTGTG CAACATATTT TACACAACGT TCTGAATTTT TTCAAACAAT TTTTTATGTC CGGGGTAGTT TTTTTTTTTT TTCCGATTTT GAATTTTTGA CCGTATTTGT AATT 
Length1784
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21113997.. 21116380
Download Sequence
A.thaliana
AGI-codeAT2G17970.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.8167 Ahg491860 CDK-activating kinase 1AT
11.1355 Ahg945111 hexokinase 1
11.6619 Ahg483031 RNI-like superfamily protein
14 Ahg486115 Protein kinase superfamily protein
22.0454 Ahg481048 violaxanthin de-epoxidase-related
24.8193 Ahg493917 succinate dehydrogenase 2-2
28.1425 Ahg488271 Pentatricopeptide repeat (PPR-like) superfamily protein
34.2929 Ahg488893 RNA-binding (RRM/RBD/RNP motifs) family protein
35.9444 Ahg928555 Protein kinase superfamily protein
38.2623 Ahg488541 heat shock factor 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression