Detail



ID : Ahg481165

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2
Sequence
ATGCAACATA ATAAAATATC TATTTTCATA ACCAACTCGA TATGGCTGCT CCACAAAAGA AAACAGGTTT GTAATTATAG AGATCTTTTG TTTCCCATAA ACTGGTTAAA TGTTTTCAGA AACTAAAATA AAATGAGCTT GACACTAGAG TTTCTGCTAC TTCTAATTGT ACTTGTCTTG AGTTACCATG CTCATTCTGG CTCTATTGTC AAATTTCTTC CTGGTTTTGA AGGCCCTCTT CCTTTTGAAC TTGAAACCGG GTATATTGGT ATTGGTGAGG AAGAGGAAGT GCAATTGTTT TACTATTTCA TAAAATCTGA GAAGAATCCA AAAGAAGACC CTCTTCTTCT ATGGTTAACT GGAGGGCCTG GATGTTCCTC TCTCACTGGC CTTCTTTTTG AGAATGGACC GGTGGCTTTG AAGTTTGAGG TTTACAATGG AAGTGTTCCA TCTTTGGTCT CTACTACATA TTCATGGACA AAGATGGCCA ACATAATATT CTTGGATCAG CCTGTTGGAG CTGGCTTCTC CTATTCAAGA ACTCCACTTG TTGATAAAAT TAGTGACACG GGTGAAGTTA AAGGGATCTA TGAGTTTCTT CAAAAGTGGT TAAGCAAACA TCAACAATTT TTTTCCAACC CTTTTCATGT TGGCGGAGAT TCTTATTCCG GTATGGTTGT TCCCGCCCTA GTTCAAGAAA TTGCAAAAGG AAATTATCAA ATAAATCTAC AGGGTTATAT CCTCGGAAAC CCGATAACAG ATACTGAATC TGAACAGAAC TATCAGATTC CATATGCTCA TGGAATGGCA TTAATCTCTG ATGAACTATA CGAGTCAATG AAGAGAATCT GCAAAGAAAA TTATGTGAAT GTGGATGCAC TTAACACAAA ATGCTATAAA CTCATAAAAG ATTATCAAAA GTGTATTCAT AAACTGAATA AGTATCATAT ATTATTACCT GACTGCGATA TAACATCTCC TGATTGCTTT TTATATAGGT ATTCTCTCAT GACCTTTTGG GCCAACGACA AGAGCGTTCG CGGAGCTCTG CAAGTCAATA AGGGAAGTAT AGGAGAATGG GTGCAATGTA ACTATAAAAA TATTTCGTAT AATTACGACA TCAAGAGCAG CGTCGCATAC CATATGAAGA ATAGTATTGA TGGCTACCGA TCTCTTATCT ACAATGGTGA CCATGATATG ATGGTGCCTT TCCTTGCAAC TCAAGCCTGG ATAAGATCTC TCAATTATTC CATCACTGAT GATTGGAGGC CTTGGATGAT AAACGATCAA ATCGCTGGAT ATACAAGAAC TTATTCCAAT AAAATGACAT TTGCTACTAT CAAGGCAAGT CTTCTTGTTT CAACTTAAAA TTTTTATT 
Length1378
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1271819.. 1276882
Download Sequence
A.thaliana
AGI-codeAT2G22980.4
Descriptionserine carboxypeptidase-like 13
TAIR curator summary
Alias[SCPL13][serine carboxypeptidase-like 13]
Gene coexpression
MR
MR Locus Description
16.4924 Ahg494517 Domain of unknown function (DUF23)
23.7487 Ahg473207 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
38.8844 Ahg489230 Polynucleotide adenylyltransferase family protein
39.3446 Ahg322057 Endonuclease/exonuclease/phosphatase family protein
43.4281 Ahg892263 RAB GTPase homolog C2A
44.5421 Ahg486926 thylakoid ATP/ADP carrier
52.4595 Ahg314421 sirohydrochlorin ferrochelatase B
53.6377 Ahg496151 target of early activation tagged (EAT) 2
54.0555 Ahg489123 cellulose synthase-like A02
60.7454 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression