Detail



ID : Ahg473207

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473207|fgenesh2_kg.1__3161__AT1G29950.1
Sequence
AAAGCTTAAG TTTTTACGCA TCACCGATTC ATTTGATCCA AAGGGTTTTC ATTTCTTCTA CGAGTTTGCG AGAAGAGGAA CGGTATTTAA AAATACACTA AAAACTTGAT ATTGCAAGAA CCAAAGATGC CCTGGACAGC CTTCTTCATG TTTTTCAACA GGACTTGCAC TCGTCTGGTT GTCTTTTTCC TCGTTATTCT GTAAATTTGA TCCTTTCAGG TGAGCCAGCT TCTCATTTCA CATCTTCTGT TTTGGTCTGC AGTTACTTAG TCATGAAAAC AAATCTTCTT GTTGCCACCT TATTTTTAGC TTCTTTTGTT TAAACTATTG GTGTTCCTTT CTTGTTTTGC AGGTGTTGTT TCCGGTATCC GGAGTAGCTC TTTGTTGTTG TGCTTATTTT ACTGGTTAGT GTGAGAATGT GCATTGTTGG AAACAAGAAG GGAAACCGAT CATTGAAGGA AATAGGAACT TTTATGATGA CTACATGTTT CATTGCTAAT TACCAATCCG TTCAAGTTTG CCAGGCTGAA TATTTCAGAC AGTTGCTTAA GCCTGTAACG TAGTCTAGCG TCTGGAGTTT TCGGAAATTG GGGGTTTTGA GCGGCTATCT ACTTTTGATT TCGAAAGAAT TAAGAGTCTG GTATTCTGAA GAGCTGTGTG GGGGAGCTTC TGGTTTTGGG GGTAAGGGCT CTGGTGGAAA TTCGTGATAT CTTTAGTATG ATGGCCATAA CTTGATATAG CATTTGGTTC GACTGTCAAC TTAGTGTAGT AGTAACTGAG CAGCTGGAAG CTTACAAAGG CGGTAGTCGA AAAATTTAAG CAGCCTGCAG TTTGAGGTGT ACAACTTGTT TTTCTCTTTG TGTTTCGCTT TTACCTTTGC ACGGGTTTTC TGATGCAGAA CAATCAGTTT CCTCACTTCT CAGATGAAGT GGGTGACAGA AATATGCACA ATCCGTATGC ATCAGGGTCA TCCTTTGATG CTTTGTTCCC ACCATGTGCA AAGTTGCCAT ACCATGGTGT TGAACTTCAA CCGTCTGCGG TCTGTCCAAA GAATTTTGTC ATCTTCGATC AAACGTATGA CCGCAGCCAA GTGATGTACC ATCCTGGGCT GACTCACAAG CTCATGAATA CCCCATCATT GAACAATTTA GCTTCGACAT TTCAGAACGA GTACTCTGGG GGAAGTTATG GTAACTATGG TAACTATGAC CAAGAAGCAT CCTCTTCTTA TCAAGAGGAT CCGAATGAGA TTGATGCCCT CTTGAGCGCA GATGAGGATT ATGAAGATGA TGATAATGAA GGTGATGAGG ATGGTGATTC AGAAGAGGTC AGCACTGCTC GTAATTCTTC CAGGGATTAT GGAAACACCT CAGCAGAATC TTGTTGTTCC AGCTATGGGT ATAACAACAA CAACAACAAC AACTCAAGGA AGCAGAGTTT ATCGGGCAGT GCTAGTAGTA ACAATGATGG GAAAGGACGG AAAAAGATGA AGAAGATGAT GGGAGTGTTG AGGAGAATTG TCCCGGGAGG AGAACAGATG AATACAGCTT GCGTTCTTGA TGAAGCTGTT CAGTATCTCA AGTCACTTAA AATCGAAGCA CAGAAACTTG GCGTTGGACA TTTCTCAAAC CAACCTTGAA TGCTACCAAT ATTCGTTCTT CCACCACTAT TGTTTCTTCG AAGGTAAATC ATCGGTCCAG CGCTTATCTG GACCTTTCTC TCTCTATATT CCTCCCTCTA CTCTCTTCCT TTTGCAGGAT GGTATCTACT TTATGTTGAA TCTCTCTTAT ATTTTGCTTT TGTGTTATTG CTTCGATGAA GAAGCTGTGT TTGCACAAGT ACTTGTGGAT TTGATTTG 
Length1858
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12521084.. 12523878
Download Sequence
A.thaliana
AGI-codeAT1G29950.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.81025 Ahg324310 TRAF-like family protein
9.79796 Ahg942896 Phosphoenolpyruvate carboxylase family protein
10.198 Ahg474663 CBS domain-containing protein / transporter associated domain-containing protein
10.6771 Ahg476192 cyclin-related
11.6189 Ahg477338 bromodomain and extraterminal domain protein 10
12 Ahg481141
12.4499 Ahg473005 B-box type zinc finger protein with CCT domain
22.7596 Ahg480442 Zinc finger C-x8-C-x5-C-x3-H type family protein
23.6643 Ahg480219 binding
23.7487 Ahg481165 serine carboxypeptidase-like 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression