Detail



ID : Ahg481413

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481413|fgenesh2_kg.4__473__AT2G25620.1
Sequence
TCTTAAACCC TAAAATTCGT GTAAAATCCA TTGTTTACGA ATCTCTCATC TAAAGCTACA TTCTCCGATA AATCCTTTTA ATCGACTCAC TGACTCGTGA GTTGACTCGT AAGCTGTTTC TCTAATTGCT TATAGAATTT TTATGCGATG ATGTTTCAAT ATGGAAGAAA CTAGAAGAAT TTCTGATCCA GAGAATGGGA GTTCGAGTTA CGGCGGTAAA CCGCCGAATC CACTCTCTTT CTCTTCTTCC TCAGCCGCTG CCGTATACAA GCAAAGCTTC GACGGCGAGC GATCGTTGGC TCCGTGTAAT AAGAGGTCAC TTGTTCGACA CTCATCTCTC GTGAAGACAA AGGTGTCAGA TATATCTGTT GAGAATGAGT TTACTTTAGA GAAGAACAAG TCTGAGTTTG TTCCTGCTAT GCGTTCTGGA GCTTGGTCTG ATATTGGATC CAGGGCAAGC ATGGAAGATG CTTATCTATG CGTTGATAAT TTCATGGATA GCTTTGGACT TCTGAATTCT GAGGCCGGTC CAAGTGCCTT TTACGGGGTA TTTGATGGAC ATGGTGGGAA GCATGCTGCT GATTTTGCAT GTCACCATAT ACCGAGGTAC ATTGTTGAAG ATCAAGAGTT TCCTAGTGAA ATCAATAAGG TGTTGTCTTC AGCATTTCTT CAAACAGACA CTGCCTTCTT AGAGGCGTGT TCATTGGATG GGAGCCTTGC TTCAGGAACT ACTGCTTTGG CAGCTATTCT TTTTGGGAGG TCGTTGGTGG TAGCAAACGC TGGAGATTGT AGAGCAGTCT TATCCCGTCA GGGAAAAGCC ATTGAAATGT CAAGAGACCA CAAACCCATG AGCAGTAAGG AGAGAAGACG CATTGAGGCA TCGGGTGGAT ATGTATTTGA TGGCTATCTA AATGGACAAC TTAATGTGGC TCGTGCGCTC GGTGACTTTC ATATGGAAGG CATGAAGAAG AAGAAAGATG GTTCTGATTG TGGACCTCTC ATTGCAGAGC CTGAGCTCAT GACAACTAAA CTAACAGAAG AGGACGAGTT CCTCATAATC GGGTGTGATG GGGTTTGGGA TGTGTTCATG AGCCAGAATG CTGTAGATTT TGCCAGAAGG AGACTACAAG AGCACAATGA CCCGGTCATG TGTAGTAAAG AGCTGGTTGA GGAAGCTTTG AAGAGGAAGA GTGCGGATAA TGTGACGGCA GTGGTTGTGT GTCTTCAACC ACAGCCACCA CCAAACTTGG TAGCACCGAG GCTGAGAGTT CACAGAAGCT TCTCGGCGGA GGGTTTGAAA GATCTACAGA GCTACTTGGA TGGCTTGGGG AATTAATTGG GGGACATGGG GATGGTGACG AATGATTGAT TCTCTGTTTT TGTTTTGTCT TTTCTTACAA TTTATAGTTT TGGTTTTGGA GGTTTTGTTC TGTTAAATTC TTGCAATTTG AGTAACTTAT AACATGAGGC GGCATACAAT AATTTATTGT TTGGTAGGAT ATATTTTTTT TGTCACTTTT GCATAATAAT AATTCTGCTT CAGTCT 
Length1546
Protein Sequence
Protein Residue
Map Locationscaffold_4: 4284419.. 4286587
Download Sequence
A.thaliana
AGI-codeAT2G25620.1
DescriptionDNA-binding protein phosphatase 1
TAIR curator summaryEncodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.
Alias[AtDBP1][DBP1][DNA-binding protein phosphatase 1]
Gene coexpression
MR
MR Locus Description
9.94987 Ahg316209 CCAAT-binding factor
23.0651 Ahg895553 cardiolipin synthase
25.4558 Ahg943407 sequence-specific DNA binding;sequence-specific DNA binding transcription factors
26.4953 Ahg487147
26.7208 Ahg481300 selenium binding
28.4605 Ahg478927 RNA-binding (RRM/RBD/RNP motifs) family protein
33.6749 Ahg890214 nucleotide binding;nucleic acid binding;RNA binding
36.1248 Ahg904413 phosphoesterase
36.1801 Ahg922379 Glycosyl hydrolase superfamily protein
37.229 Ahg325494 translocon at the outer membrane of chloroplasts 64-V
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression