| Annotation |
|---|
| Description | jgi|Araly1|316209|fgenesh1_pm.C_scaffold_2001242 |
| Sequence |
ATGTCAAAGT TAAAGCCTTT GAGTAAATCA TCGCAGGACT TGAGTCTTCT CACATCTGAT ATCGCATCAT TCGCTTCTTC TATCGGCTTA GCTTCATCTC TTCCTTCTTC TGGTTTCAAC GATACTGATT TCCGAAAACC TGCTAAATCC CAAACCCAGA AACGGAAAAA ACCTAAGAAG GAGCAGAAAC ACAAGAATGA AGTTAAAGAA GGAGAGCCAA AATCGAACAT TGGGAATGAA GAGGGAAACG CTTTTGGAGC GAGTAAGCAA GACAAAGATG CCCCTGTGAA GCAAACGATA CAACCGAAGC CAAAGCCTGG ATTTTTATCG ATTGATGATG AGAGTACTGG GATTAAGGCA AAACGTTTCG ATGAATTCAA GAGTTTGCCT AAGTTACCAT TGGTGAAAGC GAGTTTATTG AGCTCGGAAT GGTACAATGA TGCAGCGGAG CTTGAGGAGA AGGTGTTTGG TGGCAGGAAA GTGGCGGTGG CGAATAAGGA GGATTTTAAG GGTGTGGTGG AGAAGAAGAG AGAATTAGGA GAGAGATTGA TGTGGCAATA CGCAGAGGAC TTTGTAACTT CGAAAGGAAA GAGTGGTGAT ATGAAGATGG TGATTTCTGC TCAAAAGTCT GGGACAGTAG CTGATAAAAT CACTGCCTTT GAGATTATGG TTGGAGAGAA TCCCATTGCA AATATGAGAT CTCTTGATGC CTTATTGGGA ATGGTGACCT CAAAGGTTGG AAAAAGATTT GCATTTAAGG GTCTTAAGGC TCTATCAGAA ATTTTGATCA GGCACATTTT TCTTACTCTC CCGATGAGCT ATAGACTTAT GTTATTACCT GATCGCAAGC TGAAGACACT TTTACAGCGA CCCTTAAACA GGATTCCGGA AAATAAGGAT GGTTACTCGC TTTTGCTGTT TTGGTACTGG GAGGATTGCT TGAAACAGAG GTATGAGCGC TTCGTCACAG CCCTTGATGA ATCATCTAAA GATATGCTTC CAGAGCTTAA AGACAAGGCT TTAAAGACAA TATATTTCAT GTTGACAAGC AAATCAGAAC AAGAGCGGAA ATTGCTAGTG TCATTGGTGA ACAAGCTGGG GGATCCTCAA AACAAGAGTG CATCTAATGC TGATTATCAC CTGACAAATC TTTTGGCGGA TCATCCTAAC ATGAAGGCTG TGGTTATAGA TGAAGTTGAC TCCTTTCTCT TCCGACCCCA TCTTGGGTTA CGTGCAAAAT ATCATGCTGT TAACTTTTTG AGTCAGATCC GATTGAGCCA CAAAGGAGAG GATCCAAAGG TGGCAAAACG TCTAATTGAT GTATATTTTG CCCTATTTAA GGTTTTAACT ACAGAAGCAA ATAGGAAACA AGGCGCAGAT GACAAAGGAG CCGCGGAGAA GAAAAAGTCC AACCCAAAGG ACACAAAACA AGAAGTGGCA ACTGATTCAC CTATTGAGTT GGATTCAAGA ATTCTATCAG CTCTACTGAC GGGAGTTAAC AGAGCTTTTC CATATGTTTC CACTGACGAG GCTGATGATA TAATTGAATC CCAGACGCCG GTGCTGTTCA AACTGGTACA CTCGGCGAAT TTCAATGTGG GAGTTCAATC ACTGATGCTT CTTGACAAGA TCTCATCTAA GAATAAGATT GTTGAAATGT TTATTGGGCT TCTTCTCAGA GCCATGAAAA ATGATATAAA TGTGAAGCGT GTGGCTGCAT TCTCCAAAAG AGTCTTGCAG GTTGCGCTTC AACAGCCACC ACAGTATGCC TGTGGATGCC TTTTCCTATT GTCTGAAGTG TTAAAAGCAA GGCCACCTCT ATGGAAGATG GTGGTCCAGA GGGAATCAGT TGAGGAAGAA GAAGATGTAG AACATTTTGA GGATGTGATA GAGGGAGATG ATATTGATCC CAATAAGAAA GCAGAGAATG ACGAGAATGA TGTTGAAGTT GATCATGATG GTGGCGAAAA GACAAGTAGA GATGGTGATT CTTCTTCAGA TGACGAAGAG GCTTTGGCAG TCAGGCAATC TGATGAAGAA GATGATTATG CTTCTGATGA TTCTGAAGAG CTAATTAGAA ACGAAACTCC CCAGCTTCAA GAAACCATGG AGGTCTCTAA TGATATGGAA AAAAGAAGCC AACCGCCTGT GAAATCGAGT TCTCTTCCTG GAGGATATGA TCCTCGTCAT AGAGAACCTT CTTACTGTAA CGCAGACCGT GCAAGTTGGT GGGAGTTGGT GGTTCTTTCA AAACATGCTC ACCCCTCGGT TGCTACAATG GCGGGAACCC TTCTCTCAGG AACAAATATT GTTTACAACG GAAACCCGCT GAACGATTTA TCTCTAACTG CTTTCTTGGA TAAATTCATG GAGAAGAAAC CAAAGCAAAA CACTTGGCAT GGTGGTTCCC AGATCGAACC TTCCAAGAAG CTTGACATGT CAAACCGTGT GATTGGAGCT GAGATTCTCT CATTAGCAGA AGGAGACGTG GCTCCTGAAG ATCTAGTCTT CCACAAGTTC TATGTGAACA AGATGAACAG TACGAAGCAG TCAAAGAAAA AGAAGAAGAA GAAGAAGCTA CCTGAAGAAG AAGCTGCTGA AGAACTTTAC GATGTGAATG ATGGTGATGG TGGAGAAAAC TACGGTAGTG ATGTTGAATT CGAGGGTGGT GATGAGAGTG ACAATGAGGA GATTGAGAAT ATGCTGGATG ATGTTGATGA TAATGCTGTG GAAGAAGAGG GCGGTGAATA TGACTATGAT GATCTAGATG GAGTAGCCGG CGAGGATGAT GAAGAGCTCG TGGCTGATGT GAGCGATGCA GAGATGGACA CAGACATGGA CATGGACCTG ATTGATGAGG AAGATGTTGA TGATGGTGAT AGTGGTGGTG ATGATGATAG TGATGGTGAT GATGGTCGTG GTAAGAAGAA AAAGAAAGAG AAAAGAAAAC GGAAATCTCC ATTTGCGAGT CTTGAAGAGT ACGAGCATTT GATAGACCAA GACGAGAAGG ATAATTCGAA GTCTAAAAGA AAAGCAACAT CAGAGCCCAC AAAGAAGAAG AAAAAAAAGA AGACCAAAGC ATCAGAGTAA |
| Length | 3090 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 14496008.. 14501390 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G72440.1 |
| Description | CCAAT-binding factor |
| TAIR curator summary | Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development. |
| Alias | [EDA25][SWA2][embryo sac development arrest 25][SLOW WALKER2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg479365 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 4.12311 |
Ahg478024 | GTP-binding family protein |
| 6 |
Ahg492297 | FK506 BINDING PROTEIN 53 |
| 8.3666 |
Ahg478548 | RNA binding;RNA binding |
| 8.94427 |
Ahg474417 | Ribosomal RNA processing Brix domain protein |
| 9.38083 |
Ahg473739 | |
| 9.38083 |
Ahg470196 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 9.48683 |
Ahg921968 | Transducin/WD40 repeat-like superfamily protein |
| 9.94987 |
Ahg481413 | DNA-binding protein phosphatase 1 |
| 10.247 |
Ahg912885 | RNA polymerase I specific transcription initiation factor RRN3 protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|