Detail



ID : Ahg481549

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481549|fgenesh2_kg.4__609__AT2G26770.1
Sequence
TTTTGTGAAG ATTCAAGAAC AGATCTATAA AATGACAAGG GTTACACGCG ATTTCCGGGA TTCATTGCAG AGAGATGGTG TTCCTGCAGT ATCAGCAGAT GTGAAATTTG CTTCAAGTAG ATTTCCTAAT TATAGAATTG GAGCTAATGA TCAGATATTT GATGTTAAAG ATGACCCTAA AGTGATGTCG ATGAAAGAGG TTGTTGCGCG TGAGACAGCA CAGCTTATGG ACCAGCAAAA ACGTTTGTCT GTTCGTGACC TCGCTAATAA ATTTGAGAAG GGATTGGCTG CAGCTGCTAA GCTATCTGAG GAGGCAAAAC TTAAAGAAGC AACTTCCTTG GAGAAACATG TTCTTTTAAA GAAACTTCGA GATGCATTGG AGTCTCTAAG AGGACGTGTG GCCGGTAGAA ACAAGGATGA TGTAGAGGAA GCCATTGCCA TGGTTGAAGC TCTGGCTGTT CAGTTGACTC AGCGAGAAGG AGAGCTGTTC ATAGAAAAAG CGGAAGTGAA GAAGCTAGCG TCTTTCTTAA AGCAGGCCTC AGAGGATGCT AAGAAACTTG TCGACGAGGA GAGAGCTTTT GCACGTGCTG AGATTGAAAG TGCCAGAGCA GCTGTACAAA GAGTGGAAGA AGCCCTGCGA GAACATGAAC AGATGTCTCG GGCCTCTGGG AAACAGGACA TGGAAGACTT AATGAAGGAA GTTCAAGAAG CTAGGCGGAT TAAAATGCTG CATCAGCCAA GCAGGGTCAT GGACATGGAA TATGAGCTTC GAGCACTGAG GAATCAGCTT GCAGAGAAAT CTAAACATTT TCTTCAGCTA CAAAAGAAGC TCGCAATGTG CAGAAAGAGC GAGGAAAATA TATCCCTTAT ATATGAAATA GATGGCACTG AAGCTCTAGG TTCTTGTTTG CGAGTTAGAC CTTGCGCCAA TGATGCTCCT GATCTTTCCA AGTGTACGAT ACAATGGTAC CGTTCATCTT CTGATGGCAG CAAAAGGGAG CTTATATCAG GTGCCACAAA ATCAGTTTAC GCTCCCGAGC CTTTTGATGT TGGACGAGTC TTACACGCAG ATATCACTTA CGATGGCCGT TTGCTTTCAT TATCCACTGT TGGAAAGATT GATCCAGCTG CTGGATTGGG TAGCTACGTG GAGGCATTAG TACGGAAACA CGATGTTGAT TTCAATGTAG TTGTGACCCA AATGAGTGGG GAAGACCATA CATCAGAATC TATCCACCTG TTTCACGTTG GTAAAATGAG GATAAAGCTT TGCAAGGGAA AGACAGTCAT TGCGAAAGAG TACTACTCCA GTGCGATGCA GCTATGTGGA GTGAGAGGAG GTGGAAATGC TGCAGCTCAG GCATTGTATT GGCAGGCGAA GAAAGGTGTA TCCTTTGTGA TAGCTTTTGA GTCTGAGAGA GAAAGAAACG CTGCGATCAT GCTTGCACGA AGATTCGCTT GTGATTGTAA TGTGACGCTT GCTGGTCCAG ACGACAGAAC AGAGACGGGT CAAAGCCCTT GAAGAATGGC TCTTAACTAA GTTGTGATTT TAGTATCCGT AAGAGCTTTT TTTTTTTTGT TTTGTAGTTT ATATATTGTT TGAATTGTAC TTCTGTTTGT GTGTAAAAAT ATGGAATCAG TGTAAGAGGT GATGGTGAAT CTATATGTAA CGGGTGGCTT GTGTTTATTC ATTTGTTTTG ATCTT 
Length1705
Protein Sequence
Protein Residue
Map Locationscaffold_4: 9796941.. 9800906
Download Sequence
A.thaliana
AGI-codeAT2G26770.1
Descriptionplectin-related
TAIR curator summary
Alias[SCAB1][stomatal closure-related actin binding protein 1]
Gene coexpression
MR
MR Locus Description
7.61577 Ahg483938 spliceosomal protein U1A
9.16515 Ahg495041 Protein of unknown function, DUF647
10.3923 Ahg333029 Acyl-ACP thioesterase
12.9615 Ahg936457 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
13.7477 Ahg324617 embryo defective 1703
17.4642 Ahg939036 squamosa promoter-binding protein-like 12
18.5742 Ahg486655 Protein of unknown function (DUF3133)
18.6548 Ahg488895 golgi nucleotide sugar transporter 4
23.4521 Ahg474815 Plant neutral invertase family protein
25.8263 Ahg920634 Leucine-rich receptor-like protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression