| Annotation |
|---|
| Description | jgi|Araly1|324617|fgenesh1_pm.C_scaffold_5002161 |
| Sequence |
ATGGAGGTTC TAAACTCTGC TCTTCCTAAT AATGGTTTCT TCAATTTGTC GTCTTTCTTG TCCAATTCGA ACAGGAGACT CACTAACAAG AGAAACCAGC ATCGATTCAA CTTGCCCATC TCCAAATTCC ACTACTACCG CGTTTCAATT CTCCGAGTCT CGGCTCGGTT CGGAGAGACC TCGAGGCGAC GTAATTCGCT GAGGAAGAAG ATTATCGGTG ATGAGAATTG GCGTTCGACT CCGAAATCTT CTGACCCAGG TACGAAACCT CTAAACGAAA GCCATAATTT CGATCACAGT GATGATTTGG TCGAGTTAAG TAGCACCGAG GGATTGAAAG ATAGTGTTGC TCAAGATTCG AATTTGCTGA ATGAGCTTGA AGACTGGGTT GCTAGGTATC AGAAGGAAGC AGAGTATTGG GGTATTGGTT CGAATCCCAT TTTCACTGTC TATCAGGATT CTGTTGGAAA TGTGGAGAAA GTAGAGGTTG ATGAAGACGA GATCTTGAGT AGAAGTCCAG GTCTTGAGGA TTTGGAATTA GTGAGTTCTA GGGTTCTATA TGCGAAGAAA TTAGCTAAAC AGATGGAGAA CGGGGAAAAT GTGATCCATA AGGATAGTTC TCTTGTCAAG TTCGTTTCTT CTTCTTCATC AGAGGAAGAG TTTCGTTTTG TTAGCTCAAT CCAAAACGCA ATTCTTCGTC TCGACTTAAT TCCAAAGTTG CCGGTGATTG GCAGAGCTGT TTTGTGTGGT TACATTGGAC TCTGGTTGCT GAAAACGGTG CTTGTGTATA GGAAGAGTAA TGAGGTTGAG TGTACAGAGT TGGAGAAGGA GATGATGAGG AGAAAGATGA AAGCTTGGAA GGAAAATGAA ATGTCGGAAA AAGGTACTGT GGAAGTTTTG CAGAAGGAGG GTTTGGATAA GCCATTGGTT TCGTTTGAGA AGCCTAAGTT TGATCGGAAT GAACTTATGA GTAGTATTTC TAAAGTTAAG GGTTCAGAGA AGAAACTGGA ACTCTTGAAT TCTTCTCATG TTGAGAGTGG TGATTCCTTG GACTTTGATG ATAAGATCCA TGAAATCAAA GCAATGGCTA GACGAGCACG GGAGATAGAA GCTGGTATAG AACTTAATGA AAAGGAGAAG CGCGAGGTGA ACAAAGAAAC GAGCGACAAT GATGAAGATA TGCGGTCACA GAGCAGTCTT CCACATGAGG GTTTGACACC CAGTGAAGGT GATGATGATA AACAGGAAAC CTTGGGGATT TCGACTGAAA TTAATCAAGA AAACACTGAA ATGTTTGATT TGGCTATTCC AATGGTGAAT GGGGCTATGG TAGATTCTGG TTCTCCTATT CATGAAATGG CAGCATCTGA CAAAGAAAAG GTGAGTAATG TGGTACCACT AGTTCCTACA GACGGAGTCA TCCAATCTTC TGATGTCTCT AAGGATAAGT TGGGTATTAT GAATAATAGC ACTGGTCGTA AGTCACGGGT CATACGGTCT GTAAAAGAGG CTAAAGAGTT CCTTTCAAGA AGAAGTGGTG AGAAAGAGCT TACTCAGGAA CCTTCTCAGA TGATAGCCCA ATACAGTGAT GAAATCTTTC CAAAGCAGAG CGACGAAGAG CGTGGTGTAG CTAGAAAACA CGAATTGGTT GACAAAAATA AAATCCTTGG TGCAGCTGTC AATGGAACCT TGAAATCTGC ACTTGAGTCT ACTTCTTCTG AACCGTTGGG GAAGGATGTT GAGTCTCCAC CCCAAAAGAA TGATTACCAA AAACTCTCAG AACCTGGGAA TGCAGTTAAG GGATCGAGCA AGCAAAGAGA TTCTTCAAAT AAAATTGAAG AGCGCAAAAC AAGTTTTTTC AGATCAGCCA AAAGTTCTTC TGGTGATACT GAACAAATAG AGAAGGCAGA ACCATCAGGG AAGGAGAATT GGATAGAGAA AAACTACCAT GAATTTGAGC CTGTTGTTGA AAAAATGAGA GCAGGATTTA GGGATAATTA TATGGCTGCT AGAAAGGGTG AAACTCGGGA GCCAGGTACC ATTGCTGAAA TTGCAGAACT TTACCGCAGT GTGTATAATG ATGAGCTTGA GTGGATGAAG GACGAAAAGC TAAGAGACAT TGTCTTCCGT GTTCGAGATA ATGAGCTGGC TGGTAGGGAT CCATTTCACC TGATTGATGC TGAAGACAAA GCTATGTTTT TGCAAGGCTT GGAGAAGAAA GTTGAGAAAG AAAATGAGAA ACTGTCTCAT CTGCATCAGT GGATTCATTC AAACGTTGAA AACCTGGACT ACGGAGTAGA TGGCGTCAGT GTGTATGATC CACCAGAAAA GATCATACCG AGATGGAAAG GGCCTTCGCT TGATAAAAAC CCCGAGTTTC TCAATAACTA TCATGAACAG CGCGAAGCAT TGTTTTCTGG AAAAGCTGCA TCTGTATCTC CTGTGAAATA TGAAGAACAG AGCTCTCATC AGGAATTATC AGAGTCTGCT TCCTCTGAGA ACACTCTCAC CCCTTCATCT GAAATTACCT CAAGCCAGCC AAAGATTGTT GTAGAAGGAA GTGATGGATC TGTTAAACCT GGGAAAAAAT CAGGAAAGGA GTATTGGCAG CACACGAAGA AGTGGTCACG TGGGTTCCTC GAGTTGTACA ATGCAGAGAC TGATCCAGAA GTGAAAGCTG TTATGAGAGA CATGGGAAAA GACTTGGACC GATGGATTAC AGAAGATGAA ATCAAAGACG CAGCTGATAT AATGGAAAAG CTGGCAGAGA GGAACAAGAA GTTCATGGAA AAGAAACTGA ACAAACTCAA GAGAGAGATG GAGTTGTTTG GTCCTCAAGC TGTTGTGAGC AAATACCGCG AGTATGGAGA AGATAAGGAA GAAGATTATC TTTGGTGGTT GGATCTACCG CATGTACTGT GCCTTGAGTT GTACACAGTT GATGACAACG GAGAGCAGCA AGTAGGGTTC TACACATTGG AGATGGCAAC AGATCTCGAG TTAGAACCCA AACCACATCA TGTGATTGCT TTCGAGGACG CTGCGGACTG TCGAGACCTC TGTTACATTA TTCAAGCTCA TTTGGATATG CTACGAAGTG GAAACGTTTT CATTGTTCCG CGTCCGCCAA AGGATGCATA TCGAGAAGCC AAGGCGAATG GGTTTGGTGT AACGGTTATT AGGAAAGGAG AACTGAAGTT GAATATTGAC GAGCCATTAG AAGAAGTAGA GGAAGAGATA TGTGAGATAG GAAGCAAGAT GTACCATGAT AAGATCATGG GAGATCGATC TGTGGATATA AGCTCGTTGA TGAAAGGTGT CTTTAACCTG AAGACCAAAC CTACTGGCCG AAGAAGAAAA CGATCAAAGC ATGCTCTGAA AGATTCTAAC AAGAAAAGTA GCTGA |
| Length | 3405 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 19372346.. 19376020 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G61780.1 |
| Description | embryo defective 1703 |
| TAIR curator summary | |
| Alias | [emb1703][embryo defective 1703] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg490927 | Zinc-finger domain of monoamine-oxidase A repressor R1 |
| 2.82843 |
Ahg487264 | pentatricopeptide (PPR) repeat-containing protein |
| 5.2915 |
Ahg936621 | methyltransferases |
| 6.32456 |
Ahg474241 | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases |
| 7 |
Ahg475104 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein |
| 7.48331 |
Ahg472070 | methylthioalkylmalate synthase-like 4 |
| 9.79796 |
Ahg490673 | RNA-binding CRS1 / YhbY (CRM) domain protein |
| 10 |
Ahg488521 | hydroxyproline-rich glycoprotein family protein |
| 10.1489 |
Ahg487213 | Shugoshin C terminus |
| 10.583 |
Ahg928125 | Metallopeptidase M24 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|