Detail



ID : Ahg482001

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482001|fgenesh2_kg.4__1061__AT2G30840.1
Sequence
GAAGAAGAAG ATGGAAGCAA AAAACGATCG TGCTAGTGAG GTAAAAGCTT TCGACGAGAT GAAGATCGGC GTAAAGGGTC TCGTCGACAC CGGAGTTACT CAGATCCCAC GTATCTTCCA TCACCCACAT CTCAGTTTAA CCGACTCAAA TCTACTTCTT TCCTCTACAA CGATGGTTAT ACCAACGATC GATCTCAATG GAGGCGTGTT CGACGAGTCC ACAGTCACGC GAGAGAACGT GATCGCGATG ATCAGAGACG CGGTTGAGAA GTTCGGGTTT TTCCAGGTGA TTAACCATGG GATTCCTATT GATGTTATGG AGAAGATGAA ATATGGGATT CGTGGGTTTC ATGAGCAAGA CTCAGACGTG AGGAAAAAGT TTTATACTCG TGACATCACC AAAAAGGTCA AGTATAACAG TAATTTCGAT CTTTATAGCT CTCCTTCAGC TAATTGGAGA GATACCTTGA GTTGTTTTAT GTCCCCTGAT GTTCCTAAAA CAGAGGACTT ACCAGATATT TGTGGGGAAA TTATGTTGGA GTATTCGAGA CGAGTGATGA AACTAGGGGA ACTAATCTTT GAGCTTTTAT CAGAAGCTTT AGGGCTGGAT CCTAACCACT TGAAAGAAAT GGATTGCACA AAAGGTTTAT TGATGCTTTC TCATTATTAC CCGCCTTGTC CTGAGCCTGA TCTTACTTTC GGTACAAGTC AGCATTCAGA CAGATCTTTT CTCACTATTC TTCTTCAAGA TCACATTGGT GGGCTTCAAG TTCTTCAGAA TGGTTACTGG GTTGATGTTC CTCCTGTTCC AGGAGCTCTT CTCGTTAATC TCGGAGATCT TTTACAGCTT ATGACGAATA ACAAGTTTTT GAGCGTGGAA CATAGAGTTT TGGCTAATAG AGGGGAAGAG CCGCGGATCT CAGTCGCATC TTTCTTTGTG CATCCTTTAC CGAGTTTGCG AGTTTATGGA CCGATAAAAG AGCTTTTGTC TGAGCAAAAC CTTCCCAAGT ATAGAGACAC TACAGTCAGT GAGTACACAA ACCATTACAT GGCGAGAGGA CTCGATGGGA AATCTGTGTT GCTTGATTTC AAGATCTGAT AATTTCACTT GATTGTTCCG TACGTTATGA AAGAAAGTTT ATCTCCCACT CAAACAAATG TAA 
Length1163
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13742284.. 13743639
Download Sequence
A.thaliana
AGI-codeAT2G30840.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg344726
7.28011 Ahg919779 branched-chain amino acid transaminase 2
9.94987 Ahg934838 Integrase-type DNA-binding superfamily protein
14.4914 Ahg910866 Protein of unknown function (DUF707)
14.9666 Ahg492103 Protein of unknown function, DUF584
17.1172 Ahg927405 magnesium transporter 1
18 Ahg490677 Papain family cysteine protease
21.3542 Ahg949730 pfkB-like carbohydrate kinase family protein
22.0454 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
22.383 Ahg484401 Melibiase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression