| Annotation |
|---|
| Description | jgi|Araly1|482489|fgenesh2_kg.4__1549__AT2G35230.1 |
| Sequence |
GGAATCTAGT TTCGTCTCAT TTCTTCTTCG TTGACACAAT TAGGGTTCAC TTCAATTCTC TTCTCTGGAT CGTATTACTT GGGGAAATTT AAAGATCTGG CTCTTTTGGG TTAGCTCGGA TCCAAATTCT CATGTGAAAG ACCTGAACTT TTGCTCCATC TTAATCGTTT TTTTCTTCTT CTTGGGCTGG TCTGGTGGAT ATACAGAGAA TTGATAGTGT TTGAATTGTA ATTCTGCTTT AGTGTTTGAT CGAGTTTCTG AGCTTAGTAT CGTGGGGTTT TGGGTTCAGG GGAGGATACA GTAGCTTAAG AACTGAGGAT CTAGTTTCTT AGGCTAGGCA CTTTCAGCTG AATTTTGATT CGTTTCTGGA CTCATTAGTT TGGTAATGAT TAGTTTTGGA TATTTGTTGG ATTAGGTAAC TACTAGACAG AGGGATTAGC TACCAGAGAT TTGGGTTTTG GCTGATTTAG GTTGGTTGGT TTTTGGATTG GTAGTGAGGG TTTACCAATA GCATATGGAT TTTTGTGGAG ATGGATAGGC CTAGACAAAA TGATCATTTG GGTGTGAATA AGATTGGGAG AAATATCAGA AAGAGTCCTC TGCATCAACC GACTTTCGCT GCCAATGCTA GCAACGTTGC CGGGGCAAGG CCTCAGACAC AGCCTCAGGT TTATAACATA AGCAAGAACG ACTTTAGAAG TATTGTTCAG CAGCTAACGG GTTCTCCATC ACGTGAATGC CTTCCTCGGC CTCCTCAAAA CAACCCGCCA AAGCCTCAGA ATACACGGTT GCAGCGGATC AGACCATCCC CCTTAACGCA GATAAACCGG CCTGCGGTTC CTCTCCCTAC CATGGCTCCT CCACAATCTC ATCCTCAGTT TGTTAGACAG CATCCACCCC AGCCGCCTTT CCCACAAAGC ACACAACAAC CATTGATGGG TCACAGGGAC CAGTTTTGGT CTAATACAGC TGAGTCTCCC GTCTCAGAGT ATATGCGTTA TCTTCAAAGT TCACTTGGAG ATTCAGGACC CAATGGTAAC CAAATGCAGC CAGGTCATGA GCAGCGGCCC TATATCCCAG GTCATGAGCA GCGGCCATAT ATCCCAGGTC ATGAGCAGCA GCCATATATC CCAGGTCTTG AGCAGCGGCC ATATATGCCA GGTCATGAGC AGCGGCCATA TATCCCAGGT CATGAGCAGC CTCAGTCTCA GTCTCAGCCT CAACCTCAAC CTCAGCAACA TATGATGCCT GGATCGCAAC CTCGAATGAA TATGCAGGGC CCTCTTCAAT CTAACCAGTA TCTACCACCA CCCGGGTTAG TTCCTAGCCC AGTGCCTCGT AATCTTCCTT CCCCTCGGTT CAATGCTCCT GTACCTGTCA CGCCTACTCA GCCCTCTCCC ATGTTCAATC AGATGTATGG TGGATTTGCT TCTCCTCGAT ATAACGGTTT TGGACCACTG CAATCACCTA CATCCCAATT TCTTCTACCA TCTCCTACCG GTTACCCGAA TATGTTCTCT CCGAGATCAC CTTACCCATT GCTATCACCA GGAGTTCAGT ATCCTCAACC ACTTACCCCA AACTTCTCAT TTTCACAAAT TGCTCAACAA GGAAGTCTTG GACCCGGTGC AGGTCCAGGT CAAGGTCCTC CTCAGCCTCC TCCTTCGCCA GGGCTCATGT TCCCGTTATC TCCATCTGGG TTCTTCCCCA TCCCAAGTCC AAGATGGAGT GATTACTAGG TGCTCTCTTT TCTATCTATC CGATTTATTG AATTGAGTAA ATCGCAGTAT GGTTATTCAA GTCTCCTTAG GTTAGTCTAT ACTTTGAAAG AAGCTTAAAA CTTCAGAGCC TACAGTGGAA TAGACGCAGC AGAATAGATG CGTAAAACAC TAAAGGAGCT TTTAGAAGCA AGGAAGATTT ATAGGTGTTT TTTGGGACGA TGATGATTAC CTTTGTTTTT GTTTATCACA AAATTAGTTT TATCTTTGCG TAATTTGTAC ACAGACTACA GATGAACTCT TCAATTTATA TGATTTTT |
| Length | 2038 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 15851771.. 15853878 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G35230.1 |
| Description | VQ motif-containing protein |
| TAIR curator summary | Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system. |
| Alias | [IKU1][HAIKU1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg495427 | Transducin/WD40 repeat-like superfamily protein |
| 5.09902 |
Ahg472531 | Vacuolar sorting protein 39 |
| 5.47723 |
Ahg480280 | MAK10 homologue |
| 8 |
Ahg930298 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| 11.5326 |
Ahg486889 | HEAT repeat ;WD domain, G-beta repeat protein protein |
| 17.7482 |
Ahg494737 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 18.1108 |
Ahg485891 | Plant-specific GATA-type zinc finger transcription factor family protein |
| 20.0998 |
Ahg484139 | |
| 20.2485 |
Ahg940276 | RING/U-box superfamily protein |
| 22.1359 |
Ahg482750 | ARF-GAP domain 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|