Detail



ID : Ahg482636

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482636|fgenesh2_kg.4__1696__AT2G36590.1
Sequence
TTCAACAACT TCTCATTTCT AAAACCTTTT AAAAATCTCT CTACCACTTC TAATTGGACT TGATTTCCCA CCCACCATAG ACTCTTCTTT TCCATTGTTA GCGACCATCT ATTATAAAGG GAAAGGCTCT TAGCTGCAGA GACACAATAA CCATTTGGTG ATCATGAGCG CTAAGAATCG CATAAACAAT GTCGGAGAAG ATGTTGATAT CGAAATCCCT GACACTGCTC ATCAGATAAG CCGCGATTCA TGGTTTCAGG CAGCGTTCGT TCTGACAACC AGTATAAACA GCGCATACGT GTTGGGATAT TCAGGAACAG TCATGGTTCC TTTAGGATGG ACTGGTGGTG TGGTTGGTCT TATTCTTGCT ACTGCAATCT CACTCTATGC AAACACTCTC GTAGCCAAGC TTCATGAGTT TGGTGGCAAA AGGCACATTC GCTATAGAGA CCTCGCGGGG TTCATTTACG GTAGAAAGGC TTATTGTCTT ACATGGGTGC TGCAATATGT CAATCTTTTC ATGATAAACT GTGGATTCAT CATACTAGCT GGTTCCGCTT TAAAGGCTGT TTATGTGGTT TTTAGGGATG ATCATGCCAT GAAGTTACCT CATTTTATAG CCATTTCGGG TCTGATTTGT GCGGTTTTTG CGATTGGGAT ACCTCATTTA TCTGCTCTTG GGATCTGGCT TGCGGTTTCG ATCATCCTCA GCCTCATCTA TATCGTTGTG GCAATCGTGT TATCGGTTAA AGATGGAGTT AAAGCACCTT CAAGAGATTA TGAGATACAA GGATCATCTT TAAGCAAACT TTTTACCATC ACTGGAGCAG CCGCAACACT AGTTTTCGTA TTCAACACAG GAATGCTTCC AGAAATTCAG GCAACAGTAA GGCAACCGGT TGTAAAAAAC ATGATGAAGG CTCTATACTT TCAATTCACG GTGGGTGTTT TACCGATGTA CGCGGTTGTA TTCATCGGAT ATTGGGCTTA CGGATCCTCA ACCTCGGCTT ATCTACTAAA CAACGTTAAT GGCCCAGTTT GGGTCAAAGC CCTTGCTAAC ATCTCCGCTA TCCTTCAATC CGTTATCTCT TTGCACATTT TTGCAAGTCC AACATATGAG TATATGGACA CAAAGTTTGG GATCAAAGGA AACCCATTGG CGTTAAAGAA CTTGTTGTTT AGGATCATGG CAAGAGGCGG GTACATAGCG GTTAGTACGC TTCTATCAGC ACTCTTACCA TTCCTTGGGG ACTTCATGAG CCTCACTGGT GCAGTGAGCA CATTCCCTCT CACATTCATT CTAGCCAACC ACATGTACTA TAAGGCTAAG AACAATAAGC TCAATCCTTT GCAAAAGCTA TGGCATTGGC TCAACGTTGT CTTCTTCAGT TTGATGTCTG TTGCTGCCGC CATTGCAGCT CTTAGGCTCA TCGCCCTTGA CTCCAAGAAC TTCCACGTTT TTGCAGATTT GTAATTGGTT GGATTTCTTA TCAATAAAAC TAATTTTTAA TAA 
Length1513
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16481694.. 16483962
Download Sequence
A.thaliana
AGI-codeAT2G36590.1
Descriptionproline transporter 3
TAIR curator summaryEncodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed in leaves, flowers and siliques but to a much lesser extent in roots.
Alias[ATPROT3][ProT3][PROLINE TRANSPORTER 3][proline transporter 3]
Gene coexpression
MR
MR Locus Description
10.3923 Ahg943255 methionine sulfoxide reductase B6
12 Ahg488487 O-acyltransferase (WSD1-like) family protein
12.6491 Ahg492412 Phosphorylase superfamily protein
14.1774 Ahg317230 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
14.4914 Ahg485641 alpha carbonic anhydrase 1
19.5959 Ahg476200 TIFY domain/Divergent CCT motif family protein
19.5959 Ahg472318 RING/U-box superfamily protein
20.347 Ahg472188 jasmonic acid carboxyl methyltransferase
20.4939 Ahg477964 poly(A) polymerase 3
22.6936 Ahg946577 cellulose synthase-like A01
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression