Detail



ID : Ahg482718

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482718|fgenesh2_kg.4__1778__AT2G37260.1
Sequence
CATCCAACGT TCCCTATAGT GACACGTGTA TTCATTACAG TGTCGGCCAA ACTCCAAAGC TCAACGAACT CATACGAAGG GATACATCAT CATCGCTCAA TAATCACTAA CCGGATCCGG ATAAGTTCGG ATCCATCAGA TTTTCTTCGT TCCTAACTCC TAAAAAGGAA TCCTTTTCAC AACTTCAGTT TTTGCATTCA CCGTGAGTGT TCTACTTTTG GTCAAGTAAT GGAGGTGAAG GATGGTGAAA GAGTGGTAAT AGCAAAACCG GTGGCCTCAA GGCCTTCTTC AAGCCCTAGC TTCAGGACAT TCACTGAGCT TCTCACTGAT TCAGTTACTG TATCTCCCCA ATCGAATTGT CACGCGATTG TAGACGCTGC TATAAGACCA AAGACTTTGA GGTTCAACCA GCCAGTTGCA GCTTCGGTCT CATGTCCACG GGCTGAAGGA AATGGTATTG GAAATGAAAA GTCTTGTGAT GATTCAGATA GCAGAAACTA TGTCGTTTAT AAACCAAAAG CAAAGCTTGT CTCCAAAGCA ACTGTCTCTG CATTGGCTAA TATGCTTCAG GGGAATCGGC AACAGACTTG GAGACAAACC GAAACAGTAT CCTATGGGAA GAGTGTGAGC CAAGGTACAC ATCGAGCGGG TCCTAATCTA GTCCAGAAAG TTCCATCCTT TACGGAATCA GAGACATCTA TTGGTGACAG ATCTTCAGTG GACGGATACA ACTGGAGGAA ATACGGACAG AAGCAAGTTA AAGGAAGTGA GTGTCCAAGA AGTTACTACA AATGCACACA CCCAAAATGT CCAGTGAAGA AGAAAGTAGA GAGATCAGTG GAAGGTCAAG TATCAGAGAT TGTGTATCAA GGTGAACATA ATCATTCAAA GCCTTCTTGT CCACTTCCAC GGCGCGCTTC GTCATCAATC TCTTCAGGGT TTCAGAAACC ACCAAAAGGG ATTGCTTCTG AAGGATCAAT GGGACAAGAC TCTAACAATA ATCTCTATTC TCCTCTTTGG AACAATCAAG GCAATGACTC TACTAAAAAC AGAACAGAAA AGATGAATGA GGGATGTGTT ATAACACCAT TCGAGTTTGC TGTTCCAAGA TCAACAAATT CAAATCCCGG AACTTCGGAT TCCGGCAAGA GTAGCCAATG TGATGAAGGA GAGCTTGATG ATCAAAGCAG AAGCAAAAGA AGGAAGAACG AGAAGCAATC TAGTGAAGCA GGAGTATCGC AAGGCTCAGT GGAATCAGAC AGTCTTGAAG ATGGATTCAG GTGGAGAAAG TATGGACAAA AAGTGGTCGG AGGCAATGCG TATCCAAGAA GTTATTACAG ATGCACAAGT GCTAATTGCA GAGCAAGGAA ACATGTTGAG AGAGCGAGTG ATGATCCAAG AGCTTTCATT ACAACCTACG AGGGTAAACA TAATCATCAT TTGCTCTTGA GCCCTCCAAC TTCCTCTGCT CTTCCCTTTA ACTCACCACA GCTTTCTAAC TCCCCACAAC TTTCTAAGCA GACCATTTAG 
Length1530
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16879397.. 16881387
Download Sequence
A.thaliana
AGI-codeAT2G37260.1
DescriptionWRKY family transcription factor family protein
TAIR curator summaryEncodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function alleles are associated with a reduction in interploidy lethality.
Alias[ATWRKY44][DSL1][TTG2][WRKY44][DR. STRANGELOVE 1][TRANSPARENT TESTA GLABRA 2]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
5.09902 Ahg925797 myb domain protein 90
8.24621 Ahg494741 dihydroflavonol 4-reductase
9.16515 Ahg488585 glutathione S-transferase phi 12
9.16515 Ahg484714 HXXXD-type acyl-transferase family protein
9.21954 Ahg947001 UDP-Glycosyltransferase superfamily protein
11.9583 Ahg492580 leucoanthocyanidin dioxygenase
12.6491 Ahg359227 dihydroflavonol 4-reductase
13.4907 Ahg487632 Cytochrome P450 superfamily protein
14.3875 Ahg495482 UDP-glucose:flavonoid 3-o-glucosyltransferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression