| Annotation |
|---|
| Description | jgi|Araly1|483249|fgenesh2_kg.4__2309__AT2G41700.1 |
| Sequence |
ATGGGTTCAT CGATGAGGCA ATTGAAGGCC ATGCTCCGCA AGAATTGGCT CCTCAAAACT CGTCATCCCT TCGTTACTTC AGCTGAGATT TTACTTCCGA CTCTTGTAAT GTTGCTGTTG ATAGCCGTCA GGACTCGGGT TGACACCACA ATTCACCCGG CTCGCTCGAA CATAGAGAAA GATACGATCG TCGAAGTGGG AAAAGGCAAC TCTCCTAGTT TTCCACAAGT TTTGAAGCTT TTGCTTGCTG AGGGGGAATT TTTAGCTTTT GCACCTGACA CTGATGAAAC AAATAACATG ATCGACATTT TGTCTCTTAA GTTTCCGGAA CTGCGGCTAG TTACTAAAAT TTTTAAAGAT GACATTGAGC TGGAAACTTA TATAACCTCT GCTCATTATG GTGTCTGCAC CGAAGTGAGG AATTGTTCGA ATCCAAAAAT AAAAGGAGCA GTGGTATTCC ATGAACAAGG ACCTCATTTG TTTGATTATA GCATCCGCTT GAACCACACA TGGGCATTCG CAGGATTCCC TAATGTCAAG TCGATCATGG ACACAAATGG ACCTTATATC AATGATCTGG AAATGGGGAT TAATACCATA CCAACAATGC AATACAGCTT CAGCGGATTC TTGACTCTTC AGCAGGTGGT AGACTCTTTC ATTATATTTG CTTCTCAGCA AAATATCGAC TTGCCATTAT CACATTCAAA TCTTGGTTCA GCTCTAAGCT TTGAGCTGCC ATGGACTCTG TTTAGCCCCT CAGTGATAAG AATGGTTCCA TTTCCAACCC GCGAATACAC TGATGATGAG TTTCAATCTA TTGTCAAAAG CGTAATGGGA TTGTTGTACC TTCTGGGATT TCTGTTTCCA ATCTCCCGGC TTATCAGCTA CTCTGTTTTT GAGAAGGAAC AGAAAATAAG AGAGGGACTT TACATGATGG GCTTGAAGGA TGAGATCTTT CATTTGTCGT GGTTTATCAC ATATGCATTG CAGGCAGCAT TTTCTGTTGT CAACAATATT GACTTCAGCT GGAAAAAGCA GACGCTTTAC TTCTTTCGAT ATATTGTATT TGCATTGTGC TCTGGGATTA TTACAGCTTG TACGATGGGA AGTCTCTTTA AGTATAGTGA TAAGACATTA GTCTTCACAT ACTTCTTTTT ATTTGGGCTC AGCGCAATCA TGCTCTCATT TATGATATCA ACATTTTTCA CTCGAGCAAA GACAGCTGTG GCAGTTGGGA CCCTAACCTT TCTCGGAGCC TTCTTCCCTT ACTACACTGT AAACGATGAA TCTGTCTCCA TGGTATTGAA GGTAGTTGCT TCTTTGCTTT CGCCTACTGC ATTTGCTCTT GGGTCAATCA ACTTTGCTGA TTATGAGCGT GCACATGTTG GACTTCGTTG GAGCAATATA TGGCGGGCAT CTTCTGGAGT AAGCTTTTTT GTCTGCCTCT TAATGATGTT GCTCGACTCT ATTCTTTACT GTGCACCTGG ACTTTATCTG GACAAGGTCC TCCCCAGAGA AAATGGTGTG CGGTACCCAT GGAACTTCAT CTTCAGCAAG TGCTTTGGGA GGAAGAAAAA AAACTTCCAA AATCGCATTC CAGGTCTCGA AACTGATATG TTTCCGGAGG ATGTAGAGCT TAATCAGGGA GAGCCTTTTG ATCCTGTTAT TGAATCAATA AGCCTGGAAA TGAGGCAACA AGAGCTTGAT GGGAGGTGCA TACAAGTTAG AAATCTGCAT AAGGTCTATG CCTCAAGAAG GGGAAATTGT TGTGCAGTTA ATTCATTGCG ACTTACATTA TACGAGAACC AGATACTTTC ACTTCTGGGA CATAATGGAG CTGGTAAAAG CACAACAATA TCAATGCTTG TTGGCCTTCT TCCCCCAACG TCTGGAGATG CCCTGATACT TGGAAACAGT ATTATAACAA ACATGGATGA GATACGGAAA GAACTAGGTG TTTGCCCTCA GCATGACATC CTCTTTCCAG AACTGACAGT TAGAGAACAC TTGGAGATGT TTGCGGTTCT TAAAGGTGTT GAAGGAGATT CCTTGAAGAG CACAGTTGTT GATATGGCGG AGGAAGTGGG ATTGTCCGAT AAAATTAGTA CACTTGTGCG GGCACTTTCC GGAGGCATGA AGAGGAAATT GTCACTTGGA ATCGCATTGA TAGGTAACAG TAAGATCATC ATTCTCGATG AACCAACCAG TGGAATGGAT CCGTACTCAA TGCGTCTTAC ATGGCAGTTA ATTAAGAAAA TTAAAAAGGG TAGAATAATA TTGTTGACAA CACATTCCAT GGATGAAGCT GAAGAACTTG GAGATCGGAT AGGAATCATG GCAAACGGGT CTCTTAAGTG TTGTGGCAGC AGTTCGATTT TCCTGAAGCA TCACTATGGG GTTGGTTACA CTCTTACGCT AGTAAAGACT TCTCCAGCTG TCTCTGTTGC CGCACGTATA GTTCATCGTC ATATTCCTTC AGCAACCTGT GTGAGTGAGG TGGGAAACGA AATTTCTTTC AAGCTGCCTT TGGCTTCCTT GCCTTGTTTC GAAAACATGT TCAGAGAAAT CGAAAGTTAC ATGAAGAATT CTGTTGACAG ATCTAAGATT AGTGAGATTG AGGACTCAGA TTATCCTGGT ATTCAGAGTT ATGGTATATC TGTCACGACA CTTGAAGAGG TGTTTCTGAG AGTTGCTGGC TGTAACTTAG ATATCGAAGA TAAGCAGGAA GAAATATTTG TTTCTCCTGA TACCAAGGCT TCTCTGGTAT GCATTGGATC TAATCAGAAA AGTATTATGC AACCCAAGTT GCTAGAAAGT TGTAATGAGG GGGCTAGAGT TATAATTACC TCAGTTGCAA AAGCTTGCAG ATTAATTGTT GCTGCAGTTT GGACTCTCAT TGGATTCATT AGCATGCAAT GTTGTGGTTG TTCCATTATC TCGAGGACAA TGTTTTGGCG GCATTGCAAA GCATTGTTCA TAAAAAGAGC CAGATCTGCT TCCAGAGACC GCAAAACAGT GGCATTCCAA TTCATCATTC CTGCAGTTTT CTTGCTTTTT GGCCTTCTTT TTCTTCAGCT CAAGCCACAT CCTGATCAGA AATCCATAAC TTTGACAACT GCATATTTTA ATCCTCTCCT GAGCGGCAAC GGTGGTGGTG GTCCGGTTCC TTTTGATCTG TCTGAGCCAA TTGCCAAAGA GGTTTCTCAA TATATCGAAG GAGGCTGGAT TCAGCACTTG AGGAATACTT CATATAAATT TCCTAATCCA AAAGAGGCAC TGGCTGATGC AATTGATGCA GCAGGTCCCA CGTTGGGCCC CACTCTACTT TCAATGAGCG AATTTCTGAT GTCTAGTTTT GATCAGTCCT ACCAGTCAAG GTATGGGGCA ATTTTAATGG ATGGCCAGCA TCCAGATGGG AGTTTAGGAT ACACCGTATT ACACAACGGT ACTTGTCAGC ATGCTGGTCC AATCTACATC AATGTTATGC ATGCTGCGAT TCTCCGACTT GCTACGGGTA ACAAGAATAT GACAATTCAA ACCCGAAACC ATCCTTTGCC CCCTACAAAA ACTCAGCGCC TACAGCGTCA TGATTTGGAT GCCTTTTCCG CTGCAATTAT CGTTAATATT GCGTTCTCGT TCATCCCGGC CTCCTTTGCT GTTCCCATTG TTAAGGAGCG GGAGGTGAAA GCAAAGCATC AACAGCTTAT CAGTGGGGTT TCTGTTCTTT CATACTGGTT ATCAACGTAC GTATGGGATT TCATCAGTTT CTTATTTCCG TCAACATTTG CAATAATCCT CTTCTACGCT TTTGGTCTGG AACAGTTTAT CGGAATAGGA CGGTTTCTTC CGACTGTTCT TATGCTCCTG GAGTATGGCT TGGCAATTGC ATCATCAACG TACTGTCTTA CATTTTTCTT CACCGAGCAT AGCATGGCTC AGGCAACTTC TAGCTACTCT AATGTTATTC TTATGGTGCA CTTCTTCTCT GGTCTTATCC TTATGGTTAT CTCATTTGTT ATGGGCCTTA TTCCAGCGAC TGCTAGTGCA AATTCATATC TAAAGAACTT CTTCAGATTA TCACCAGGAT TTTGCTTCTC TGATGGATTG GCTTCATTAG CGCTTCTAAG GCAGGGGATG AAAGACAAAT CTAGTCATGG GGTGTTTGAA TGGAACGTCA CTGGAGCGTC CATCTGTTAC CTGGGTTTGG AGAGTATATT CTACTTCCTT GTGACGCTTG GGCTTGAGCT CATGCCTTTC CAAAAGGTGA TGTCGTTCTC AATTGGGGAG TGGTGGCAGA ATTTCAAAGC TTTCAAACAA GGTGCTGGTT CTAGTTCTAC AGAGCCACTT CTCAAGGATT CGCCTGGAGC CATTTCCGCT GATATGGAGG ATGACATAGA CGTGCAAGAG GAAAGAGACA GGGTGATTTC GGGGTTGACA GACAACACCA TGTTCTACTT ACAGAACCTG AGGAAGGTCT ATCCTGGTGA CAAACATCAC GGCCCAAAAG TAGCTGTACA GTCTTTGACT TTCTCGGTCC AAGCAGGAGA ATGTTTTGGC TTTTTAGGGA CGAATGGAGC TGGGAAGACT ACTACCTTGT CTATGTTATC TGGAGAAGAA ACTCCAACTA GTGGAACTGC CTTCATCTTT GGGAAAGACA TTGTAGCGAG TCCCAAAGCT ATTCGTCAGC ATATTGGCTA CTGCCCCCAG TTTGACGCTT TATTCGAGTA CTTGACTGTG AAGGAGCACC TTGAACTTTA TGCAAGGATC AAAGGAGTAG TTGATTATAG AATTGATAAT GTGGTTACGG AAAAGTTAGT CGAGTTTGAC TTGTTGAAAC ATTCTCACAA GCCATCGTTC ACTCTTAGCG GCGGAAACAA GCGCAAACTA TCTGTTGCTA TTGCAATGAT TGGAGATCCT CCTATTGTCA TCCTCGATGA ACCATCTACA GGTATGGATC CTGTTGCCAA AAGATTCATG TGGGATGTGA TATCCCGCTT GTCGACAAGG AGTGGAAAGA CAGCAGTCAT TCTGACTACT CATAGCATGA ATGAAGCTCA AGCACTTTGC ACTAGGATCG GGATCATGGT AGGAGGCCGC CTAAGATGCA TAGGTAGTCC ACAACACTTA AAGACACGCT ACGGAAACCA CCTTGAGTTA GAGGTCAAAC CCAATGAAGT CAGCAGTGAG GAATTGGAGA ACTTTTGCCA AATAATTCAG CAGTGGCTGT TTAACGTTCC TACGCAGCCT AGAAGTTTGC TGGGTGATCT CGAAGTTTGT ATAGGTGTCT CTGACTCGAT TACTCCTGAT ACAGCTTCAG CATCAGAAAT CAGTTTGTCA CCAGAAATGG TACAAAGTAT TGCCAAGTTT CTTGGTAATG AGCAGAGAGT GAGTACTCTA GTACCTCCAT TGCCTGAGGA AGATGTGCGA TTCGATGACC AGTTATCAGA GCAGCTGTTT CGAGATGGTG GTATTCCACT TCCAATATTT GCCGAGTGGT GGCTGACCAA AGAAAAGTTT TCAGCATTGG AGTCTTTCAT ACAATCTTCG TTTCCCGGTG CAACATTCAA AAGCTGCAAT GGACTGAGTA TCAAGTACCA GTTGCCGTTT GGAGAAGGAG GATTGTCACT TGCGGATGCC TTTGGACACC TTGAAAGAAA CCGGAATCGG CTGGGAATAG CTGAATACAG CATAAGTCAA TCCACACTTG AGACCATATT CAATCATTTT GCAGCTAACT CATAGCCAGT GTATCGCTGC TTGTATAACA AAAAACCTTT GTGACCATAG CCCAAAGAGA GATCTGATCA CTCATAATCT CATTTACCCA ACATAGTTGT AAATATGACA TATATATGAG AAAGCTGTGC TCTTAATCTC TATATA |
| Length | 5886 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19360134.. 19373390 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G41700.1 |
| Description | ATP-binding cassette A1 |
| TAIR curator summary | |
| Alias | [ABCA1][AtABCA1][ATP-binding cassette A1][Arabidopsis thaliana ATP-binding cassette A1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg494576 | Homeodomain-like transcriptional regulator |
| 6 |
Ahg941505 | aspartate aminotransferase 2 |
| 9.16515 |
Ahg928001 | threonine aldolase 2 |
| 14 |
Ahg484373 | Regulator of chromosome condensation (RCC1) family protein |
| 15.1987 |
Ahg477464 | Regulator of chromosome condensation (RCC1) family protein |
| 15.6525 |
Ahg493510 | Rapid alkalinization factor (RALF) family protein |
| 17.7482 |
Ahg470730 | Thioredoxin superfamily protein |
| 17.8885 |
Ahg944763 | calcium-binding EF hand family protein |
| 19.7484 |
Ahg916997 | YELLOW STRIPE like 3 |
| 19.8494 |
Ahg337666 | cellulose synthase like E1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|