Detail



ID : Ahg494576

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494576|fgenesh2_kg.8__392__AT5G44180.1
Sequence
ATGGAAGGTG GGTCTGAGAA AACAACACCT GAAGGTGGTG AGAGTAAGTC TAAACGGAAA ATGAAAACTG CTGCTCAACT TGAAGTTCTT GAAAACACTT ATGCAGCTGA GCCTTATCCT TCGGAAGCTA TAAGAGCGGA TCTTTCAGTG AAACTGAATC TTTCCGACAG GCAGTTACAG ATGTGGTTTT GTCACCGGCG GCTTAAAGAC CGGAAATCTA CTACGCCGAG TAAACGTCAG CGTAAGGAGT TGGTAACACC TACGGCAGTT GAATCCTCGA AACCAGCCGT CAATGCTGGT GATTTGGTGG CGGGAAATGA GCTTGATTCT AGAAGAGCTG CTCGAGGAGG CGGTGGTAGT GGTGGTGGTG GTGTGACTGT TGTTAGGCGG TTTAATGAAC CGTCTTCTGC TGAGGTTAGA GCTATTGGTT ATGTGGAAGC TCAATTGGGA GAGCGTTTGA GAGATAACGG ACCGATTCTT GGAATGGAGT TTGATCCTTT ACCTCCTGGT GCATTTGGGA TGCCTATTGA GATGCCAAGC CATCGAAAGG CGACTAGGCA AGCGTTTGAG ACCAACATAT ATGTTCGATC CGATGTAAAG CCTATCAAAG ATCATGTGAG GCCCATTCGT GAATATCAGT TCATTCCTGA GCTGCCATCT TCAAGGACTG ATCATTCCGA AAGAGTTTCT CCGTCTCATC ATTTTGGAGT TCCACTTGAT GGTTCGGTTA TGAGGGCTTC AGCTGTGTCT GCTGGACATC GGGATGACTA TAAAATTTCA CCTCAGATAC CAAATTTGAA TCTTGCAACT CATCAAGGGA AGCCGGGGCA TGTCTACTCG CCTAACTTGG CCGAATATGA CTCATCGTAT CAGAAAAGCT ACGTGGATAC TGCTGCACAT GTTCATGAGG ATCCTTTTGT GAAACCTGAG AGAGACTTTG GTAATGAGGA TGAGGATGAT GATGCCCTGC AATTAGAGAG ACAACGCAAG AATGAAGAAG CAAGAATAGC TCGGGAAGTT GAGGCTCACG AGAAGAGGAT CCGAAGAGAA CTAGAGAAAC AAGATATGCT GAGGCGAAAG AGAGAGGAGC AAATAAGGAA AGAAATGGAG AGGCAAGATC GTGAAAGACG GAAAGAGGAA GAACGTCTTT TACGTGAAAA GCAGAGAGAG GAAGAGAGGT ACCTGAAAGA GCAGATGCGA GAGTTGCAGC GAAGAGAGAA GTTCTTGAAG AAAGAAACAA TCAGGGCTGA GAAAATGCGT CAAAAAGAAG AGATGCGTAA AGAAAAAGAG GTTGCAAGGC TTAAAGCTGC TAACGAGAGG GCCATTGCTC GTAAGATCGC AAAGGAATCT ATGGAACTTA TTGAAGATGA ACGCTTAGAA CTCATGGAGG TTGCTGCGTT AACCAAAGGA TTGCCTTCAA TGCTCGCTCT TGACTTTGAA ACTCTTCAGA ACCTCGATGA ATATAGAGAC AAGCAGGTGT TATTTCCCCC AACATCTGTA AGATTGAAAA AGCCCTTTGC AGTCAAGCCA TGGAATGGTT CTGATGAGAA TGTTGCAAAT CTTCTAATGG TGTGGAGATT CTTAATCACT TTTGCGGACG TTCTTGGTCT TTGGCCATTT ACCCTAGACG AGTTTGTGCA GGCATTCCAT GACTATGACC CACGACTAAT GGGAGAGATA CACATTGTTC TTTTGAAGAC TATAATCAAA GATATCGAGG GTGTTGCAAG AACGCTATTG ACCGGTGTTG GAGCAAACCA GAATACTGCT TCTAATCCCG GAGGGGGTCA TCCTCATGTT GTGGAGGGTG CATATGCATG GGGTTTTGAT ATACGCAGCT GGAGACGAAA CTTGAATGTT TTTACATGGC CTGAAATCTT GAGGCAACTC GCTCTCTCTG CAGGATTGGG ACCGCAACTG AAGAAAATGA ACATTAAGAC TGTGTCTGTT CATGATGACA ATGAGGCCAA TAACTCTGAG AATGTGATTG TCAACCTAAG GAAAGGAGTA GCAGCTGAGA ATGCTTTTGC CAAGATGCAA GAAAGGGGAC TTTCTAATCC GCGACGTTCA CGGCATCGTT TGACTCCAGG CACTGTTAAG TTTGCTGCAT TTCATGTTCT ATCTCTTGAG GGTGAAAAAG GTTTGACCAT TCTTGACGTT GCAGAGAAGA TTCAGAAATC AGGATTGAGG GATCTAACGA CGAGTAGGAC ACCTGAAGCC TCTGTTGCTG CTGCGTTGTC TCGGGATACA AAACTCTTTG AGAGGGTAGC TCCTTCTACG TACTGTGTGC GTGCTTCCTA TAGAAAAGAT GCAGGTGATG CTGAGACTAT ATTTGCTGAA GCAAGAGAGA GAATACGGGC ATTCAAGAGT GGGGTCACTG ATGTAGAAGA TGTTGATGAC GTTGAGAGAG ATGAAGACTC CGAAAGCGAT GTCGGAGATG ACCCAGAAGT TGATTTGAAC CTTAAAAAGG AAGATCCCAA TGCTCTGAAG ATAGAAAACC TAATCGGAGT CGAACCAGTG TTGGAAAATG GGAAACTGGA TACCGTGCCC ATGAAAACTG AACTGGGACT GCCTCTTACT CCCTCTCTCC CCGAGGATAT GAAAGATGAG AAAAGAGATG ACATTTTAGT GGAACAATCT CTAGAAGATG CAGTAGCAAA CGGTGAGGAT AGTGCTTGTT TTGACGAGAG CAAACTTGGG GAACAGTGGG TTCAAGGACT TGTGGAAGGA GATTACTCGA ATCTCAGCAG CGAGGAACGT TTAAACGCAC TTGTTGCTCT GATTGGTATT GCCATCGAAG GAAACACAAT CCGAATCGCC CTTGAGGAAC GGTTGGAAGT TGCAAGTGCC TTAAAGAAAC AGATGTGGGG TGAAGTGCAA CTCGACAAAC GCTGGAAAGA AGAGTCTTTG ATTCGAGCAA ATTACCTTTC ATACCCAACA GCAAAGCCGG GGCTTAATAT CGCAACTCCT GCATCTGGAA ATCAAGAAAG TTACTCAGCA GATGTGACTC CAATCTCCTC ACAGGACCCG TTGAGTCTTC CACAGATCGA TGTAAATAAC GTGATCGCAG GACCAAGCTT GCAATTGCAA GAAAATGTAC CTGGAATGGA GAATTTGCAG TATCAGCAGC AACAGGGCTA CACAGCGGAC CGGGAAAGGC TGCGTGCACA GTTAAAAGCG TATATTGGGT ATAAAGCTGA AGAGCTATAT GTATATAGGT CGCTTCCGCT TGGTCAAGAT CGAAGACGCA ATCGCTATTG GCGGTTTTCA GCATCCGCCT CTCGAAATGA TCCTGGTTGT GGTAGAATAT TCGTGGAACT TCAGGACGGA CGATGGAGGC TCATTGATTC CGAAGAGGGT TTTGATTATT TGGTGAAGTC ACTAGATGTT CGCGGTGTAA GAGAATCACA TTTACACTTT ATGTTACTGA AGATTGAAGC ATCTTTCAAG GAAGCAGTGA GGAGGAGTGT GGAAGCAAAT CCCGGGTTGT GTTCCATATC TTCTAGCATG GATTCTGATA CTGGCGAGAT CTCCACGACG TTTAAGATCG AGCTAGGGGA TAGTAACGCC ATTGAGAGAT GCAGCGTATT GCAACGGTTC CATAGTTTTG AGAAATGGAT GTGGGATAAT ATGCTGCATC CGGGTGCGTT ATCCGCATAT AAGTATGGTG CTAAGCAAAG CAGTCCGCTT TTTCGCATAT GCAGAATCTG TGCGGGACTA CACTTTGTCG GAGATATTTG CTGTCCTAGT TGCGGTCAGA TGCATGCTGG TCCGGATATT GGTGAGTTGT GTTTTGCTGA GCAAGTGGCT CAACTTGGGG ATATTTTGAG AGGAGGAGAT ATTGGCTTTA TCTTGCGTAG CTCAATCTCG TCTCCTCTTA GAATAAGACT ACTCAAGGTT CAATTAGCGC TTGTCGAAGC TTCTCTTCCA CCTGAAGGAC TTGAAGCTTT TTGGACAGAG AATCTTAGGA AATCTTGGGG TATGAAGCTG ATGTCATCAA GTTCCCCCGA AGAACTTAAT CAGGTTCTCA CAACGTTAGA GGCTGCACTA AAGAGAGATT TCTTGTCTTC AAACTTTGAA ACAACTTCTG AACTCTTGGG TTTACAAGTA GAAGCTCTCG CCAACGATTT CACTTGTGGA GTTAATGTAC TACCGTGGAT ACCGAAGACA ACAGGAGGTG TAGCTTTGAG GCTCTTTGAA TTCGACAGCT CGATTGTTTA CACAACCGAT CAAAACAAAG ATCCTCTAAA AGACAAAGAA TCTGAAGATT TCGTCGGTTT GGAGACAAAT TTTGTGAGAA ACGTTCAAGA AAAGGACGTA ATGGAGACTC TGGTGCAAGT TGCTTACACG CAAGAAGAGA ACTGGACGGA TCCTGGTTTA GGTGGTGTGT CTAGCTCTGG GCGAGGAGGT CGACCACCAC GAGGACGTGG CCGACCTCGT TCCCGTGGCA ACGGCAAGAA ACCGGCAGTT TCTGGTAGAC CACCACGAGG TGCAGCAAAC TCAAATGGCG AAACCATGTT GAGACCAAGA GCACAACCAC GTGGGGGTAG AAAGAACGGG CGGCGTATCG GCACCAAAGG CCGGAAGAGA CCAACGAAAG GAACACTAGG TATATCTAAT GAAGTAGGAG GAAGTCGGGC AAAGGAAGTT GCTGTAACCG CCAAAACTAG TCTTCCTGAT AACGACGACG ATTGGATCGA TACCCCTGAA CTGCAAGACG ATGACGGAGA AGCTAGCAGC TCAGGGAGAT CGTTTCAGTA TGAAGACTAT GATGATGATG TCATGGCTCC GATTGATGAT TTTGATGGCG GCGGTGAATC AAGTAAATTA GTAGGTAGGG GTGAATTTAG CTTACATAGT GATGATGAAT ACGAAGAAGA AGAAGAAGAA GAAGACATGA ACATGAAAAT GAATGTGAAT GTTGTTGATG ATGAAGATGA AGATTACATA AACGATGACT CATATGGTAG AGAGCAGCCG GTGATTAGCA CTCGGAAAAG GTTTAAGTTT GAAGATCCTG ATCTAACATC TTCATCGTCT TCTGATTTTC AGTGATTGAT TTTAGACAGA AACTACGAAG CTTTTTTTTT GTATTCTTCA AAATGAATGA ATTTTTTTAG TTTAACTTTT TTTAAGTTAA CGTCAATGTA ATCCTTTTGT CTCTTATGAG CCT 
Length5173
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3383786.. 3390665
Download Sequence
A.thaliana
AGI-codeAT5G44180.1
DescriptionHomeodomain-like transcriptional regulator
TAIR curator summary
Alias[RLT2][RINGLET 2]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg908335
2.82843 Ahg473745
3 Ahg472958
3.31662 Ahg938922 glucan synthase-like 11
5.74456 Ahg483249 ATP-binding cassette A1
6.9282 Ahg470391 Transducin family protein / WD-40 repeat family protein
6.9282 Ahg490443
7.54983 Ahg488346 SIN3-like 2
7.68115 Ahg932476 Protein kinase superfamily protein
9.48683 Ahg484347 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression