Detail



ID : Ahg483312

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483312|fgenesh2_kg.4__2372__AT2G42230.1
Sequence
TGTTCAAAGA TCTGCAACTT CTTCATAACT GTTCTCTCAT TCTCTTTCTC TGGTTTTGAG GCATAATGAC GGAAGAACTC ATCGACCAAT CACCACCACC TGACCCAGAC CCGATTAAAA CTCCGAATTT AGTAATCCAC CCGAGACGTG TTCCTTTCGA GCACGGCCTT CTTCCGATCC AGAAGCTTGT TTTTACCGAC CCGATTCAAA CTCTAGCTCC GATCAAGCAA AAGCTAGCTG CTTCCGCAAC GAATAACCGC GTCGGATCTG CTGCCATTTC CGATGCACTC TCGATCTCCA ATGACCATGC GCGGCTCGTT CTTGAAACTC TCGGTTCGGT GCTCCATTGC GAGACTGACC CATTGGTTTT GGCCAAACCT GAGGAAGTTG ATTCCGTCGG AGCTGATTTG AGGGATCTGA TATTGTTTCT CTACATTCAA TCGTATAAGA AGTTGTTGCC TAGGACGCAT AAGGACTCTG CTTCTGTGGC TGATGTTTGG CCATCGACTT CTGCTTTTGA TGGATACTTG TCAGCATTAT CTCCAATTCA GCTTGTTCGT AGCAACAGCC GTCGGTTTAT GCCATCACCT ACAGATGAAG AAGCTCATCA ATTATCGTAT CTGCAAAAGC ACATAGCAAA TATTGTTGCT CTCCTTGCAG AGCCTGGGGA GGGAGAAGGA GATGAATCTT TGGTCCTGTC TATGGAGAGT TTGGAGCATA TTGGGTTTCT TGTTCATTAT GGTGATAAGG GATTTGATGT ACCTTCTTTA AGCCAAGCTA GTCCTTTTTT TGCAAATTCT GATCCCAATA TGCCCGCTGT CCCCGTTCCT GCTTCCCAAG TGAATGATTG GCTTCTCAAA GACATAGCTT CTGCCATAGA AAGCATTTCT GACAGAATTT CTGGAAAAGA AAATGGGGCA TCTAATGCCT CTGATCAAGA TGCTGCAATG GCAAATTCTT TTGGAGCTCT TAATAAAGTT TCATCTAATG ACAGAGGTCC GTGTATTATT GAGGGAGTCT CTAAGACCTC ACTTTTCAAG CAGGCTTCTG ATCTTAAGGG TAGATCAGTG AAGGTTGCCA ATTGCCATGA TTCTGTTATT TATCTGTTAG CACCATTGAG ATATGCAACT GTGTATGGAT GTTCTGATTC TACTATCATT CTGGGAGCTA CTGGCAAGGC AGTAAGAGTT GAGCATTGTG AGAGAGTTCA TGTGATTGTA GCTACCAAAC GAATCTGCAT CGCCAATTGC CGTGAATGTG TGTTATTTTT GGGAGTCAAT CAGCGACCTC TTATTGTTGG TGACAACCAC AAACTACAGG TTGCTCCATA TAATACATTT TACTCACACT TGGAGGAGCA CATAACCGAG GTAGGAATTC AGCCAACTAT CAACAAATGG AATGAATCCT TGGCACTGGG AGCAGTTGAT CCGCATGACT CACTATCACA TCCGACTGGT GCCTCTGATA AACAATCTGA ACCGGCTTCT TGTGTGGACC CTGACCAGTT CACTACCTTT TTGATTCCAA ACTGGTTTGA GGGCGAAGCG CTTGGTTCCA CGAAAGACAA TCCATTTCCA TTGCCAGATG CATATAAGGC AGTGCAGCAG ACAAACCTTA AGAACTTAGA AGAAACAAGA CAATCATTAA GAGAATCATC TCTTGAAGAA AACCGAAAAC GAGAACTTAC TACAGCGTTC CACATGCATT TCAAAGACTG GCTCTACGGT AATCAAATCA AATCCACATT CTAGTTCATT TACTTCACTG GTCATGCAAT GATCTATATG TATCTGTTTC TTTGGTGATA GCAACTGGAA ATATTCGGCA ACTTTACTGC CTACAAGGCG ACTAAAGACC AATGGCGATG GAAAATGTCA GAGTCACTGT AGAGTTCTCT TGATCCGTTT TGCTAGCACG TTTGACATCA GAACTTAAAT GCACAGCACT CTCTCTAACT CCTAAAGCTC TGTTTGTGTA GGTTTCTCTC TGCTTTGATC ATATTTATTA GTTTTAAATA TCCACGTTTT TGTCCTTGAA AAACATTATG CAACCTTGTC TTTTTAAGTG TTGATTTCTT TCAATTGTTA TAAGCAGATA TCAACTTTGC TCAATACCAT CTATATAAAT CTTTT 
Length2135
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19582108.. 19585363
Download Sequence
A.thaliana
AGI-codeAT2G42230.2
DescriptionC-CAP/cofactor C-like domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.2111 Ahg478735 Lysyl-tRNA synthetase, class II
8.94427 Ahg938420 Protein phosphatase 2A regulatory B subunit family protein
11.6619 Ahg927805 NADH-ubiquinone oxidoreductase-related
11.8322 Ahg918924 importin alpha isoform 6
14.2829 Ahg476466
15.8745 Ahg345524
15.8745 Ahg345528
17.6068 Ahg935763 asparagine-linked glycosylation 3
17.7482 Ahg926502 ARM repeat superfamily protein
17.9444 Ahg327775 histone deacetylase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression