| Annotation |
|---|
| Description | jgi|Araly1|483647|fgenesh2_kg.4__2707__AT2G45140.1 |
| Sequence |
AATAACAATA AGTGAGTCTC CGGTCTAAAT TAATTAATTA AGGAGAAACA AGACATACGT TGCTGTCCCA CGTTGTTCTT TTGTTTACTC TCTCTCTCTC CTCCATCGTC GACTACCACC GGAGATCAGA GTCACCGTAC CAAAAATTCA TTTGCCTTCA TAAAGATTTG TTTTTTTTAA TCAATTGATT GAATCGGAAT AAATATCTCA TCAGAAATGA GTAACGAGCT TCTCACCATC GATCCTGTCG ACCTTCAATT CCCTTTTGAA TTGAAGAAGC AGATCTCTTG TTCTCTCTAT TTGGGTAACA AGACCGATAA TTATGTCGCC TTCAAGGTTA AAACGACGAA TCCAAAGAAG TACTGCGTTA GGCCTAATAC TGGTGTTGTT CATCCCAGAT CCTCTTCTGA AGTTTTAGTG ACCATGCAAG CTCAAAAGGA AGCTCCCGCT GATATGCAGT GTAAAGATAA GTTCTTGCTT CAATGTGTAG TGGCTAGTCC CGGAGCCACC CCCAAGGATG TTACTCATGA GATGTTTAGC AAAGAGGCAG GGCATCGAGT CGAAGAGACT AAATTGAGAG TTGTCTATGT TGCTCCACCA CGACCACCAT CACCGGTTCG AGAAGGATCT GAAGAGGGCT CTTCACCCAG GGCTTCTGTC TCCGATAATG GGAATGCTTC TGATTTCACT GCTGCTCCAA GATTTAGCGC GGACAGGGTT GATGCTCAGG ATAACTCATC TGAGGCAAGA GCTTTGGTCA CAAGACTCAC CGAGGAAAAG AACTCTGCAG TTCAATTGAA CAACAGGCTT CAACAAGAAT TGGACCAGTT GAAGCGCGAA AGCAAGAGAA GTCAGAGTGG TGGAATCCCG TTCATGTACG TTCTTCTGGT CGGACTAATC GGTTTAATCT TGGGATACAT TATGAAGAGG ACATGATCTG CTCGCTTCAA CAAAATACTC CACAAGTCTC AAAAGTGCTT AAAAAGCATT GAAAAAGAAA GAAAATCAAA TTGTGTGAGG AGGACACTCT TCTCTTCTGC CTTATCGTCG TCATGCACCT TTGATTAAAA TTCTGAACTT AGTGCGTTAG AGGATTTGTA TTACTGTTTC CACAAGACTT AGAATTTTCA CAAAGTCTCC TTTTTCATCT CTCTTTTTAC AACTTTGTGT AGTAACTTTT TCTCTCCATC TCTAATAGAA TAAA |
| Length | 1204 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 20865393.. 20867891 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G45140.1 |
| Description | plant VAP homolog 12 |
| TAIR curator summary | Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. |
| Alias | [PVA12][plant VAP homolog 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg475195 | secretory carrier 3 |
| 25.5343 |
Ahg483871 | ATP binding cassette subfamily B4 |
| 27.4955 |
Ahg919903 | Protein kinase superfamily protein |
| 34.641 |
Ahg928242 | BTB-POZ and MATH domain 2 |
| 40.0375 |
Ahg480614 | Calcium-dependent protein kinase family protein |
| 43.4741 |
Ahg325212 | UDP-glucosyl transferase 76C1 |
| 45.5192 |
Ahg488204 | pheophytinase |
| 50.1996 |
Ahg473756 | like COV 2 |
| 51.9423 |
Ahg332000 | U-box domain-containing protein kinase family protein |
| 58.1206 |
Ahg934965 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|