Detail



ID : Ahg475195

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475195|fgenesh2_kg.2__325__AT1G61250.1
Sequence
GTCTTGTCTT CAACGTTCGG CTTAATCCTT GGTCCGTGTT CAAGATCTTA GATCGATTTC TAAAGTCTTC TTCTCCGTCT TCGTCTGCTG ATAACTAGCT TCTTGAATCT TCTGAAGCTT TAATTTTTCA TAGCCATGGC TAATCGTTAT GATCCAAATC CTTTCGCTGA GGAAGAAGAA GTCAATCCTT TCGCTAATCC TAAAGGTGTT CCGCCTGCGT CGAATTCGAG ACTTTCGCCT TTACCTCCAG AGCCTGTTGG TTTCGATTAT GGTCGAACCG TGGACATTCC TCTTGAGAGA CCTGGTGGAC AGGATTTGAA GAAGAAAGAG AAGGAACTCC AAGCCAAAGA AGCTGAGCTA AAACGACGAG AGCAGGAACT CAAACGAAAA GAAGATGCTG CTGCACGAGC TGGAATCGTT ATCGAAGTGA AAAACTGGCC GCCTTTCTTC CCGCTTATCC ACCATGACAT CGCAAACGAA ATTCCAGTTC ATCTCCAAAG ACTACAGTAT GTTACCTTCG CAACGTATTT GGGTTTGGTT CTTTGTCTTT TCTGGAATAT CATCGCCGTT ACTACAGCTT GGATCAAAGG AGAAGGAGTG ACGATATGGC TTCTTGCCTT AATTTACTTC ATAGCTGGTG TTCCAGGAGG CTATGTGTTA TGGTATCGGC CACTCTACCG TGCCTTCAGA ACTGATAGTG CATTGAGCTT TGGATGGTTT TTCTTGTTCT ATATGCTCCA CATTGCTTTC TGCGTCTTTG CTGCAGTTGC TCCACCTGTC GTCTTCAAAG GAAAATCTCT TGCTGGGATC TTACCTGCAA TAGATGTCTT AAGCGGTCAA GCAATTGTTG GGATATTCTA CTTCATTGGG TTTGCGTTTT TCTGCCTCGA ATCAGTGGTT AGCATCTGGG TTATTCAGCA AGTGTATATG TACTTCCGAG GCAGCGGGAA ACAAGATCAA ATGAGACGGG AAGCGGCAAG AGGAGCCTTG AGAGCCGCTG TTTGAGAGGT TTCGTTGTAA CATTCTGGTT TGTGTATGCA ATCTTTACTG TTTCTTTCTT TTTTCTGATT TTCTTAAGTC TCTCTCTCTC TCTCTCTCTC CCTCTCTGCT CTATAAGCAC AAAAAAAATT ATTCAATTTT TCCTTTGTAC CTTTATGTCA TGTAAATTTG TTTGTTCAAA AATCAGAGTT CAGATTCATA CGTATTTCGA AACCATTCAA AATTGTTAGT TTTTTATAAG AACTCATCTT ACATCC 
Length1256
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2406428.. 2409602
Download Sequence
A.thaliana
AGI-codeAT1G61250.1
Descriptionsecretory carrier 3
TAIR curator summaryEncodes a putative secretory carrier membrane protein (SC3).
Alias[AtSCAMP1][SC3][SCAMP1][secretory carrier 3][Secretory carrier membrane protein 1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg483647 plant VAP homolog 12
6.32456 Ahg358984 NSP (nuclear shuttle protein)-interacting GTPase
9.79796 Ahg927799 Target of Myb protein 1
11.6619 Ahg493344 Bax inhibitor-1 family protein
12.8452 Ahg323774
13.5647 Ahg495151 ubiquitin-conjugating enzyme 27
15.5563 Ahg327563 senescence-associated gene 21
16.3095 Ahg482605 uridine-ribohydrolase 1
19.3907 Ahg494891 BAK1-interacting receptor-like kinase 1
20.445 Ahg473585 lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression