Detail



ID : Ahg483893

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483893|fgenesh2_kg.4__2953__AT2G47170.1
Sequence
TATTTTTAAC GCTCACTGGA TTTATAAGTA GAGATTTTTT GTGTCTCACA AAACAAAAAT CATCGTGAAA CGTTCGAAGG CCATTTCTTT GGACGGACCA TCGGCGTTAA GGAGAGAGCT TAGATCTCGT GCGGCGTAGT TTCTCCGGTG AACAGGCTTG AAAAAATGGG GTTGTCATTC GGAAAGTTGT TCAGCAAGCT CTTTGCGAAG AAAGAGATGC GTATTCTGAT GGTTGGTCTC GATGCTGCTG GTAAGACGAC TATCCTGTAC AAGCTCAAAC TTGGAGAGAT CGTCACCACT ATTCCAACCA TTGGGTTCAA TGTTGAGACT GTTGAATACA AGAACATTAG CTTTACCGTG TGGGATGTCG GGGGTCAAGA CAAGATCCGT CCATTGTGGA GACATTACTT CCAGAACACA CAGGGACTTA TCTTTGTTGT GGACAGCAAT GATCGTGACC GTGTTGTTGA AGCCAGGGAC GAGCTTCACA GGATGCTGAA TGAGGATGAA TTGAGGGATG CAGTTCTGCT TGTATTTGCT AACAAACAAG ATCTTCCCAA CGCGATGAAC GCTGCTGAGA TAACTGACAA GCTTGGGCTT CACTCTCTTC GCCAACGACA CTGGTACATT CAGAGCACAT GTGCCACCTC AGGAGAAGGG CTCTATGAGG GACTTGACTG GCTCTCCAAC AACATCGCAA ACAAGGCATA GATGGGAAGT TAGCCAGATT CCTCTTTTAC TTGTTTGGTT TATAAATCAA AGAAAGAGGT CTGTTTCGCT AGTACTAAAA GATTTATTAT TATATTCTTC TTCGTCGCTT ATCTCAAACG CAGATTACTT CTCTCCTTTT CTTCCTGAAT TTGAGTATAT CATTCTTACG TCTTCTTTTC ATTGGAGCAT CTTTCGAAAC AAAAGTTGAA CC 
Length922
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21743381.. 21745561
Download Sequence
A.thaliana
AGI-codeAT2G47170.1
DescriptionRas-related small GTP-binding family protein
TAIR curator summaryGene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Alias[ARF1A1C]
Gene coexpression
MR
MR Locus Description
2 Ahg493247 Heavy metal transport/detoxification superfamily protein
9.16515 Ahg474895 regulatory particle non-ATPase 12A
30.5778 Ahg919631 copper/zinc superoxide dismutase 1
31.1929 Ahg473977 Stabilizer of iron transporter SufD / Polynucleotidyl transferase
38.8072 Ahg478157 ADP/ATP carrier 1
40.025 Ahg927681 Insulinase (Peptidase family M16) protein
40.9878 Ahg472714 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
40.9878 Ahg951569 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
44.3621 Ahg899203 Class II aaRS and biotin synthetases superfamily protein
44.833 Ahg490783 Molecular chaperone Hsp40/DnaJ family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression