| Annotation |
|---|
| Description | jgi|Araly1|473977|fgenesh2_kg.1__3931__AT1G48410.2 |
| Sequence |
AAAATCTCAT TTCTTTGAGT TATCTCGTTT GTTCGGAGTT AGAGAGAGAT AGAGAGAGAA CACAGAGAGG AGAGAGCGAC GTAGGGTTGG TGTTTCGTAC GGATTTTCTC GGTCAAGCTT AGTTTCTCCG GCGAGAGATT GTTTTTCAGG AATCATCATG GTGAGAAAGA GAAGAACTGT TGCTCCATCT GAAGGAGGTG AAGCCTCTGG GTCTCGTGAA GCTGGTCCAG TCTCAGGTGG TGGACGTGGT TCACAGCGAG GTGCTTTCCA GCAGGGAGGT GGAGGAGGAC AACAGCAAGG TGGAAGAGGT TATACTCCTC AGTCTCAACA GGGAGGTCGT GGTGGTCGTG GATATGGGCA ACCACCACAA CAGCAACAGC AGTATGGTGG TCCACAAGAG TACCAAGGAA GAGGAAGAGG AGGACCTCCT CATCAAGGAG GTCGAGGAGG GTATGGCGGT GGCCGTGGAG GTGGACCTTC TTCTGGACCA CCGCAGAGAC AATCAGTTCC CGAGCTGCAT CAAGCTACCT CACCTACTTC TCAAGCGGTG TCTTCTCAGC CTACACTGTC TGAGGTGAGC CCTACCCAGG TGCCGGAACC TACTGTTCTG GCTCAGCAAT TGGAACAGCT CTCTGTTGAA CAAGGAGCTC CCAGTCAGGC AATCCAGCCT ATACCTTCTT CTAGCAAGGC TTACAAGTTT CCAATGAGGC CTGGTAAAGG ACAGAGTGGA AAGCGCTGCA TTGTGAAGGC TAACCATTTC TTTGCTGAAC TGCCTGATAA GGATTTGCAC CAGTATGATG TTACCATTAC CCCGGAAGTT ACATCAAGGG GTGTTAATCG TGCCGTGATG AAACAACTTG TTGATAATTA TCGTGAATCT CACCTTGGAA ACCGTCTTCC TGCCTATGAT GGTCGGAAAA GTCTGTACAC TGCTGGACCA CTTCCGTTTA CTTCCAAGGA GTTCAGAATC AATCTTCTTG ACGAGGAAGA AGGGGCTGGA GGACAAAGAC GAGAAAGGGA ATTCAAAGTT GTGATCAAGC TAGTTGCACG TGCTGATCTG CATCACCTAG GATTGTTTTT GGAAGGAAAA CAACCAGATG CCCCACAGGA AGCTCTGCAG GTTCTTGACA TTGTTCTTCG TGAGCTGCCG ACCTCTAGAA ACAGGTATAC TCCGGTGGGC CGGTCCTTTT ATTCCCCTGA TATAGGAAGA AAGCAATCAT TGGGGGATGG CTTGGAGAGC TGGCGTGGAT TCTACCAAAG CATTCGTCCT ACACAGATGG GCTTATCACT CAATATTGAT ATGTCATCGA CAGCATTCAT AGAGGCATCC ACTGTTATTA AGTTTGTCTG TGATTTGCTT AACCGGGATA TTTCATCTCG ACCTCTATCT GATGCTGATC GTGTTAAGAT AAAAAAGGCT CTTAGAGGTG TCAAGGTTGA AGTGACCCAT CGAGGAAACA TGCGCCGGAA GTACCGTATT TCTGGCTTGA CTGCTGTTGC CACTCGGGAA TTGACATTCC CAGTAGATGA AAGAAATACT CAGAAATCTG TTGTAGAATA CTTCCACGAA ACATATGGTT TTCGCATTCA GCACACTCAA CTACCATGCT TGCAAGTTGG GAATTCTAAC AGGCCAAATT ACTTACCAAT GGAGGTATGC AAGATTGTTG AAGGCCAGCG ATATTCGAAA AGATTGAATG AGAGACAGAT CACTGCTTTG CTGAAGGTTA CCTGTCAGCG CCCCCTAGAA CGAGAAAAAG ATATCATACG GACGGTAGAA CTCAATAATT ATAAGGAAGA TCCCTATGCT AAGGAGTTTG GCATCAAAAT AAGTACGTCT CTGGCTTCTG TTGAGGCTCG CATACTGCCT CCGCCATGGC TTAAGTACCA CGAGTCTGGA AGGGAAGGGA CTTGTCTGCC ACAAGTTGGT CAATGGAACA TGATGAATAA GAAAATGATC AATGGTGGAA CGGTGAATAA TTGGATCTGC ATCAACTTTT CTAGGCAAGT GCAGGACAAT CTAGCTCGTA CGTTTTGTCA GGAACTTGCT CAAATGTGCT ATGTATCTGG CATGGCATTT AATCCTGAAC CAGTCCTCCC ACCAGTCAGT GCTCGCCCTG AGCAAGTAGA GAAGGTCTTG AAGACGAGAT ATCATGATGC CACATCAAAA CTCTCCCAAG GAAAGGAAAT TGATCTGCTT ATTGTCATTC TTCCAGACAA TAACGGATCA TTATATGGTG ATTTGAAACG CATATGTGAG ACTGAACTTG GCATTGTCTC TCAATGCTGC CTGACAAAGC ATGTCTTTAA GATGAGCAAA CAATACATGG CTAATGTTGC GCTGAAGATT AATGTGAAGG TTGGAGGAAG GAATACAGTG CTTGTTGATG CTTTATCAAG GCGGATTCCT CTAGTCAGTG ATCGACCCAC CATTATATTT GGTGCTGATG TTACCCATCC TCACCCTGGA GAGGATTCAA GCCCATCTAT TGCTGCTGTT GTGGCATCCC AGGATTGGCC TGAAATCACT AAATATGCTG GATTAGTTTG CGCTCAAGCG CATAGGCAGG AGCTCATTCA GGATCTGTTC AAAGAGTGGA AGGATCCTCA GAAAGGGGTG GTGACTGGTG GCATGATAAA GGAGTTACTC ATAGCCTTCC GTAGATCAAC TGGGCATAAA CCGCTGAGGA TCATCTTCTA CAGGGATGGA GTCAGTGAAG GACAATTTTA TCAAGTTTTA CTCTATGAAC TTGATGCTAT CCGCAAGGCC TGTGCTTCGC TGGAAGCAGG TTATCAGCCA CCAGTGACAT TTGTGGTGGT GCAGAAGCGC CATCACACGA GGCTGTTTGC TCACAACCAC AATGATCGTC ATTCGGTGGA CAGAAGTGGG AATATTTTAC CTGGCACTGT TGTGGACTCT AAAATCTGTC ACCCTACCGA GTTCGACTTT TACCTCTGTA GTCATGCTGG TATTCAGGGA ACTTCTCGAC CAGCTCATTA CCACGTTCTT TGGGATGAGA ACAACTTTAC TGCAGATGGA CTTCAATCTC TGACCAATAA CTTATGTTAC ACGTATGCAA GATGCACACG CTCAGTTTCA ATTGTGCCGC CAGCATATTA TGCACATCTA GCAGCATTTA GGGCTCGATT CTACATGGAG CCGGAGACAT CAGACAGTGG TTCGATGGCT AGCGGGAGCA TGGCACGTGG AGGTGGAATG GCTGGTAGAA GCTCACGTGG GCCTAACATC AATGCTGCAG TGAGGCCACT CCCAGCACTG AAAGAGAATG TGAAGCGTGT TATGTTCTAC TGCTGAGTTG GTTCACACCC TCTATCTATC TTTATGACCT AACTTTCTAA GACTTGTCTT GTGTTTGGAT ATTTCATCAC TCTTTCTCTA TGACTATGAG ATGCTTTTCA AAACTGACTT TGGTCCTTTC TTTAACT |
| Length | 3447 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 23473448.. 23486223 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G48410.2 |
| Description | Stabilizer of iron transporter SufD / Polynucleotidyl transferase |
| TAIR curator summary | Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. |
| Alias | [AGO1][AtAGO1][ICU9][ARGONAUTE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg479762 | FRIGIDA-like protein |
| 1.41421 |
Ahg477251 | Pre-mRNA-processing-splicing factor |
| 3.87298 |
Ahg491448 | Sec23/Sec24 protein transport family protein |
| 5.2915 |
Ahg888739 | P-type ATP-ase 1 |
| 5.47723 |
Ahg903021 | auxin transport protein (BIG) |
| 6.7082 |
Ahg899203 | Class II aaRS and biotin synthetases superfamily protein |
| 6.9282 |
Ahg471924 | IAP-like protein 1 |
| 9.16515 |
Ahg938338 | Transducin/WD40 repeat-like superfamily protein |
| 10.3923 |
Ahg934902 | cytochrome P450, family 98, subfamily A, polypeptide 3 |
| 11.225 |
Ahg470642 | Ribosomal protein S5/Elongation factor G/III/V family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
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| Growth Chamber expression |
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