Detail



ID : Ahg483953

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483953|fgenesh2_kg.4__3013__AT2G47700.1
Sequence
CGTCATCTCT AACAGGTCGG ACGAGAGAGA GAGAGTAGAG GAAGGATAGA TTTACCGCAT CGGTGTTCCA AAAGGCAGAC GAAATCGGAG AGAAACAAAG AGAGATAGCG ATAGCGAGAG ATGATTTTTC ATTGATTTTT GTTTGACAAT TCTGTTTTTT TTTGTTCTTT TGAAAACGAA AATAATTTCG TGGCTTCCCT CCGATTTGGC CTGCTGGTGA AGATATGGCC GGAGCTAAAG ATTCTGGTTG CGATGATCAT CGCCGAATTG CTGGTGGATG TGGCCCTGGA AAACGCGGGA ACCAGGAGGA TGCCTCGTCT CCTGTCGAAG TATCATGCTC GATTTGCCTC GAATTGGTGG TCGATGATGG TACCAGATCC AAAGCTAAGC TCCAATGTGG CCACGAATTC CATTTGGATT GCATTGGATC GGCTTTTAAC ATGAAAGGAG CCATGCAATG CCCTAACTGT CGGAATGTCG AAAAGGGTCA GTGGTTGTAT GCAAACGGTT CTACTCGCCC CTTTCCAGAG TTTTCCATGG AAGATTGGAT CCCTGAAGAA GACTTGTATG CTTTAACTTA TCCGGAAATG CAATATCGGG TCCATTGGTG CCCGTTTGGT GAACTCTCTC AAGCAGCTGT GTGTTTCAGG GAACTGGAAC CTGCAACCAC TACATATCAT AACGAGTTCC ATGGACACCA CGCCGTTGCT GTGAATCATT CGTATCTTGC ATATGTTGGA CCGGGCCCAA CTGCTACCCC GAGAACTAGC GACAACAACA GCACAGATGA TCATCCCTGG AACAGCCACT CTAACGATCA CTTTCACCAG CTTGCTGTTG CCCCCCAGTA TCATCATCAT TCCCCATCGT TTTCACTACC CGGTGCTCAT GTGGTTGATG GTGAAATTGA CTCTTCAGCA GCACGAGGCC TACCTTATGC GCACCCATTT CTTTTTAGTA ACCGGTCTAA TCAAAGGACC TCACCAGCAA TTAACAGTTA CCAAGGAAGC AGCACCCAAA TGCGTGAACA CCATCATGCT TATAATCATC AGAGGCAACA TCATGCCAAT GGTCCCACTC TCGCACCACC TCTCATCTCC ATGACAAGAA GAGGATTACC ACCGCCACCA ATGCCAGATC AGAACGTTGG ATTCTTCCTT TATCCAAGTG GACACCATGA ACCAGAAACA GATCAAATTC ATGCTTGGGA GAGGGATTGG CTTCCGCATT TCCCTGTCCC GTCGAATCAC CGCACGATCT CTAGCTTGTG GCACAGACAC TTCTGAGAAA AGTTGTGTAC TCTAAAGTCG CCTGGGAGAA TTCTATCAGG CTTAATGATC AATGTATAAA AGAAAACTGG GGACTTGTTT GATCGTTCAA ACTTGTTTAT GATGTAACTA TAACTGGTTT CCAATGTACA TTGTGAGCTT TCTAAGAACC GTTGTTATAA TTGATTAAAC AGAAG 
Length1465
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21960908.. 21963282
Download Sequence
A.thaliana
AGI-codeAT2G47700.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[RFI2][RED AND FAR-RED INSENSITIVE 2]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg478311 Protein phosphatase 2A regulatory B subunit family protein
9.16515 Ahg483883 squamosa promoter binding protein-like 1
14.8997 Ahg495704 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1
22.6274 Ahg495846
26.5518 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
27.9643 Ahg341959 Octicosapeptide/Phox/Bem1p family protein
31.241 Ahg479052 Coatomer, beta' subunit
34.0294 Ahg488877 ARM repeat superfamily protein
44.1248 Ahg322778 GDSL-like Lipase/Acylhydrolase superfamily protein
45.6618 Ahg487300 Single-stranded nucleic acid binding R3H protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression