Detail



ID : Ahg487300

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487300|fgenesh2_kg.6__434__AT5G05100.1
Sequence
ATTCTCCCCA CTAGTTTGTG TCCGAGAGAG AGAGAGAGAG AGAGATAAAG GGTCGATAAG GTCTTTTCCG TTTCCTTGAC CCTCTTGGAT TTCGATTTCG ATTTCCTCAT CTCATCGATT TGCTTCTCAA TCTCTCTAAT TCATATCTCC TCGGGAAATT TCAATCCTTT TTTTTTCTCC TTGGTGATTT CTAAGATAAT TAATATCGAG AACATCCATC CATCGATGGC CGCTATGAGC GAGAAGGAAG CTATGGTGGA TCCTTTTTTG GTCGAGGCTC TTCAGAACCC TCGTCATCGT CTCACCATTT TGCGTATGGA GCTCGATATA CAGAAGTTCT TTCAAAGTCC AGAGCAGCAA CAATATGAGT TCCAGCCTTT GCCTACATCT TATCTTCGTC TTATTGCTCA CCGTGTTGCT CAGCATTACG GGCTGTTTAC AACGGCTTTA GACGGTGGTG GTGTTGATGG CTCAGGGAAC AGAATCTTGG CGACCAAAAC TGCGGAAAGT AGATACCCGT ATGTCTGTTT GTCTGAGATT CCTGTTAAGC AACCTGAGAT TCATGGTAGG CCTGAGGGTT TCAAAATCGC CATCAAGCCT AGACCTAACA GAGGATCTGG TGGGATTGGT AGTGGATCAG GAGTTGAAAA GAATCTTTTG AGAAGCGTTG AGGAGAGGAA AGAAGAGTAT GATAGAGCTC GGGCTCGTAT CTTCAACAGC CCTAGCAGTT CAGACTCTGA AGATTCTTCA ACACGAGCTC CTCCTCCTCC CCCTCCTCGT CTCGACTCAA AACATAATAA TACATGTCCG AGTAGAAATG AGACCGAAGT GGTGATTAAT CATATTAGTA ATCCTGTTGA TGTAGAGAGG AATGGTGTTA TCAGAGACTC AGGACGGACT TCTCGGGTTG CCATTATTAG AGATAGAGAG AAGGATCGTT ATGATCCTGA TTATGACCGT AACAGGTATG TGAGGGTTGC GCCACCGGTA CAAAACTTCA ATCCGATACC AATTCCGCTT CAGTTCCATG ACGCAATTTT CCCACAGATG CCAAGAACTC AAGCCAGCAT AAACTATGGA CATCCCTTAA ACCCAGCAAT GACGGCACCT TCTTATACAG AGTGGCCTAG TGCCACTATG ACTTATGCAC AAACATTGAA TGCGTCAGAC ACACATCATT TCAGGCACCC GAATCCTTGA CCTTTTGTCG TGTTCAGCAC AATGTCTTGT ATCCAAACAG GTTTTATTGA TGTAGCTTTA GATTTTCTGC TCTTGTTGCA AACATTGGCC ACTTTTATCA CAAGACATTA TAATATTATT ATTATCAAGC TTTTGCAATG AAATCCAAAA TCTGCAAGCA CTAGGTACTC TAAATGGGTC TGCCTGTAAA GCTTATGGCC CATTTAGGGT AGATAGTTGT GGAAATTTTT CTTGTTCGTA TGGGTCAACA TAGAAAACAG AGTCAACGTA TTTCCAAAA 
Length1479
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1775564.. 1777630
Download Sequence
A.thaliana
AGI-codeAT5G05100.1
DescriptionSingle-stranded nucleic acid binding R3H protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg479642 MAP kinase kinase 5
14.6969 Ahg473664
14.6969 Ahg900162 Glutamine amidotransferase type 1 family protein
14.7648 Ahg477791 Transducin/WD40 repeat-like superfamily protein
15.1987 Ahg496583 farnesylcysteine lyase
15.2971 Ahg496711 COP1-interacting protein 8
16.1555 Ahg487056 Protein kinase superfamily protein
17.4929 Ahg473428 tobamovirus multiplication 2A
23.5584 Ahg315769 ARM repeat superfamily protein
28.0713 Ahg483260 Insulinase (Peptidase family M16) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression