Detail



ID : Ahg484103

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484103|fgenesh2_kg.5__95__AT2G01860.1
Sequence
TATTCTTCAT GGGGTTTCGT TTCTAGACCT AAAGTTTATT CCTTTTCTAA GGTTTGTGTT CGATTTCAAA ACCCTAACTG TTCCATGATA GTGTATTGTC CTGTCTCTTC GTCACTTAGC TTCCACTTGA ATCCTCAAAC CAGGAGTCTC GGTAACATAG GAGTAACAAG AGTCAACGCG AGTCAAAGGA ACCACTTTAA GAAACTCACT AAGAATCTGC GTAATCCACG CCTAACCAAG CTTCCTCCTG ATTTTGGTGT TAATTTGTTT CTGAGGAAAC CCAAAACTGA ACCAGTTGTG GATGATTATG ATGCTGATAA TGATGTGCAA GATCAAGAAT CTGTGGATGA TGATGCTGTT GTGTGGGAAC CAGAAGAAAT CGAGGCGATT TCTTCGCTTT TTCAGAAAAG GATTCCTCAA AAACCCGGTA AACCGATTCG AGTTAGGCCT TTACCACTTC CTCAACCCCA CAAGTTACGA CCTTTAGGTC TTCCAACTCC AAAGAAGAAC ATTAGATCAG CTGCATTGTC TTCTGTATCG AAGCAAGTGT ATAAAGATCC AAGTTTTCTT ATCGGTTTAG CTAGAGAGAT TAAGAGCTTG CCTTCTTCTG ATGCTGATGT CTCTCTTGTT CTCAATAAAT GGGTTAGCTT CTTGCGTAAA GGGTCACTTT CTATGACGAT TCGAGAATTG GGTCATATGG GTTTGCCCGA GAGAGCTTTA CAGACATATC ATTGGGCTGA GAAGCATTCT CATTTAGTAC CAGATAATCG GATTCTCGCA TCCACTATTC AGGTTTTGGC CAAGCACCAC GAGCTGAAAT TGCTTAAGTT TGACAATAGT TTGGCTAGCA AGAACGTAAT CGAAGCAATG ATCAAGGGAT GTATTGAAGG TGGATGGTTG AATCTAGCCC GGAAGCTTAT ACTGATCTCG AAGAGTAACA ATCGAATACT CGACTCGAGT ATTTACGTAA AGATGATTCT GGAGATAGCT AAAAACCCTG ACAAGTACCA TCTTGTTGTT ACTCTTCTCG AGGAACTGAA AGAAAGAGAA GATTTGAAAT TGAGCCAACA GGATTGCACA GGTATTATGA AGATCTGTGT GAAACTAGGA GAATTTGAGC TCGTTGAATC TCTCTTTGAC TGGTTTAAAG AATCAAACAG AGAACCAAGC GTTGTAATGT ACACTACGAT GATCCATAGC AGGTATTCGG AACAGAAATA CCGGGAGGCG ATGAATGTGG TTTGGGAGAT GGAGGAATCA AACTGTCTCC TTGATCTTCC AGCTTATAGA GTAGTCATTA AACTATTCGT AGCATTGGAT GATTTGGGAA GAGCAATGAG GTATTACTCT AAACTCAAGG AAGCTGGATT CTCGCCAACT TATGATATTT ATCGCGATAT GATTAACGTT TATACCGCTT CTGGGCGATT GACAAAGTGT AAAGAGATAT GTAAGGAAGT TGAAGATGCT GGATTGAGGT TAGATAAAGA TACTTCATTT ATGTTGTTGC AGCTCGAAAA GCAAACAATG TCTCTTTTGC ACTGAAGATT TCTACTGTTT GAAAGTGTTT TCAGGCAAAG ATGAAAGTGG AAACTTGACA ATGTCAGAAT CAGACATAGC 
Length1620
Protein Sequence
Protein Residue
Map Locationscaffold_5: 462241.. 464009
Download Sequence
A.thaliana
AGI-codeAT2G01860.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[EMB975][EMBRYO DEFECTIVE 975]
Gene coexpression
MR
MR Locus Description
15.5885 Ahg491232 TBP-associated factor 8
15.748 Ahg484102 endoxyloglucan transferase A3
16.5227 Ahg937390 NB-ARC domain-containing disease resistance protein
16.6132 Ahg949660 Pseudouridine synthase family protein
22.383 Ahg483704 TCP family transcription factor
26.0576 Ahg915659 Disease resistance protein (TIR-NBS-LRR class) family
29.8496 Ahg485217 nuclear factor Y, subunit C1
30.7571 Ahg935056 Protein with RING/U-box and TRAF-like domains
32.8481 Ahg472014 Major facilitator superfamily protein
32.8786 Ahg935440 ARABIDILLO-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression