Detail


ID : Ahg935056

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935056|scaffold_403044.1
Sequence
TTTTGGGTAG GTTTGGACTC TCCATGGCTC CTGGTGGCAG TGCGTTGAAA GAAACTTTAG AATCTAACTC GACAGGCTTA GATTATGAGG TTAAGATGTC AAAGGTTGAG ACTAATAGCA AACCAACAAA GTCAGGTAGT GGCTCCATTG GAAAATTCCA TTCGAGCAAT GGTGTTTATG AGCTCCTCGA ATGTCTGGTT TGTACAAATC TAATGTATCC TCCAATTCAT CAGTGCCCGA ACGGCCACAC ATTGTGTTCA AGCTGCAAAC TGAGAGTGCA GAACACATGC CCTACATGCC GCTATGAGCT TGGTAACATA AGATGCTTGG CTCTTGAGAA GGTTGCAGAA TCATTGGAAG TTCCATGCCG GTACCAAAAT TTAGGGTGTC ATGACATTTT CCCATACTAC AGCAAGCTCA AGCACGAGCA GCATTGCAGG TTTCGATCCT ACAACTGTCC TTATGCTGGT TCTGAGTGTT CAGTGACGGG TGATATTCCA ACGCTTGTTG ACCATCTCAA AGATGATCAT AAAGTTGATA TGCATGATGG GTGCACTTTC AACCATCGTT ATGTGAAGTC AAATCCGCAC GAGGTCGAAA ATGCTACATG GATGCTTACG GTCTTCAACT GTTTTGGAAG ACAGTTCTGC TTACACTTTG AGGCGTTTCA GCTCGGGATG GCACCAGTGT ACATGGCGTT TCTACGGTTC ATGGGAGACG AGAACGAGGC TAAGAAGTTC AGTTACAGCT TGGAAGTTGG AGCTCACAGC CGCAAACTGA CATGGCAAGG GATTCCCAGA AGCATCAGAG ACAGTCACAG GAAAGTCCGA GATAGTCAAG ACGGCCTCAT CATCCCTAGA AACTTGGCTT TGTACTTCTC TGGCAGTGAC AAAGAAGAGC TCAAGTTGCG AGTCACTGGA CGGATTTGGA AAGAAGAATA AGCTAATGAA TGATGATGAT T
Length961
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19510626.. 19512080
Download Sequence
A.thaliana
AGI-codeAT2G41980.1
DescriptionProtein with RING/U-box and TRAF-like domains
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.3574 Ahg493844 ubiquitin conjugating enzyme 4
27.2213 Ahg480115 Acyl-CoA N-acyltransferases (NAT) superfamily protein
30.7571 Ahg484103 Tetratricopeptide repeat (TPR)-like superfamily protein
37.229 Ahg477560 ADP-ribosylation factor B1C
38.7814 Ahg923008 NRAMP metal ion transporter 2
40.2492 Ahg903199 HSP20-like chaperones superfamily protein
46.7761 Ahg942216 chloride channel D
49.6991 Ahg483433
60.3987 Ahg913045 NDR1/HIN1-like 8
66.2873 Ahg494602 translocase of outer membrane 22-V
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression