| Annotation |
|---|
| Description | jgi|Araly1|484438|fgenesh2_kg.5__430__AT3G26680.2 |
| Sequence |
AGACACTCAA TGGCCAAATA GCAACCTTTG GTGGGCGGGT AAAAGTTGAC CCTTTTGACC TTTCATTTTC ATTGAATCTC TCTGGAGAAA AAATGGATTT TTCTGATGAA GAAGACGAAG ACTGGTTTGG TTCTCGTTTC AACGACGGTG TTAATGAAGA AGAAGAAGAG GGTTTTGTGT TTTACGACGA TGTTGGAGAA AATGAAGAAG AGGAGGGTTT TGCGTCTGAT TTCTATAAGG CTGGTTCTGA TTGGTCTTGT TTGGTGGAAG ATGAAGAGAC TGTTTCTTCT TCTGAGAAGA AGAAAAAGAT GAAACAAGCG AACTTGTTTC AGATTTGGGG TTTACAAGAG AATTCTCCTG ATACAACGAA GAAGATGAAA CAAACTGATT TGTTTCAGAG TTGGGGTTTA CAAAAGCCTT CTCCTTTCAC TTCCCCTGCT TCGAATTCGT CGAAAAAGCC GACGAGTGCT CTTGGAAAGA GACGTAGAGA CTCTTCGTTT AGCAATGACT CGCCTCGACC ATGTCCTTTT TACAAGAAAC TTCCAGGAAC ACCGTTTACT GTGGATGCTT TTCGTTATGG TTGTGTTCAA GGATGTTCTG CTTATTTCCT TACTCATTTT CACGCTGATC ATTACATTGG TCTCACTAAA GCTTGGTCTC ATGGTCCTAT TTACTGCTCC TCTCTCACTA GTCGTCTTCT TAGACTTAGT CTCTCTGTCG ATCCCTCGTT TATTCATCCA TTGGAGCTAG ATGTTGAATA CACTATTAAT GGGATTAAAG TCACTTTAAT TGAAGCTAAT CATTGCCCTG GTGCTGCTCT TATTCACTTT CGGCTCTTAG ATGGAACGTG TTATCTGCAT ACTGGAGATT TCAGGGCTTC TAAAAAGATG CAAACGCATC CTCTCCTCTT TAACCAACGA GTTCATGTTC TGTATTTGGA TACAACTTAT TGCAATCCGA GATACAAATT CCCCTCTAAA GAAGATGTGT TAAGCTATGT TGTGAGAATC ACAAAGGATT TCCTCAGGAA GCAACCGAAG ACTCTGATTG TGGTTGGCTC TTATAGCATC GGAAAAGAAT GTGTTTATCT TGCTATTGCC AAAGCTCTTG GGGTTAAGAT ATTTGCAAAT GCTTCAAGAA GACGGATACT GCAATCTTTT GGTTGGGATG ATATTTCGAA GAATCTTTCT ACAGATGGGA AAGCAACATG TCTTCACGTT CTGCCTATGT CATCACTGAA AGTTGAAAGA CTCGACGAAC ACTTGAAAGT TTATAGAGAA CAGTATGGAG CAGTTTTGGC ATTTAGGCCC ACAGGTTGGA CTTACTCCGA GAAGATAGGC GAACACCTTG ATCTGATAAA ACCAACTTCT AAGGGGAAAA TCACCATTTA TGGGGTTCCA TATAGTGAGC ATTCAAGCTT CACAGAACTT CGTGAGTTTG TTCAATTCTT AAGGCCGGAT AAGATTATTC CTACGGTGAA CAATGGAAAT GCTGGAGCTC GCGAGAAAAT GCAATCATGT TTCAGAGAAT GGCTCAGACG CTGAGATTCA ACTCTAGGTG GATGGGTGAA ATTGCTTCCT ATTAGTAAGA AAATCAATGG TTTGGGCCGT TCTATTTCTA ATACTTTTTC CTTTCTCTGC AGTTTCTGAA TCCCAATATG TTGATCATTG AAGCTTTTAA GGGAGGCTTG GTGCTTCTGT AAGATTTTGA TATTGCAGTT GGTGAATACA GTAGAACTGA AGCACTTGAA GGATTCATAA TATTCTTTGA TCAAGAGGTT TTATTCTTCT CTTATACTAA TCAAGTATAT CTTCAAGTGG CTAATTCGTT TAGTTATGAG GGTTGGGAAA GAGAAGAGTT CAAAGAGTAG ACAATGCAAA GAGAGAATAA GGTAACCAAA TCAGATTCAG AATCTGAAGA TAAAGGATTG CCATTAACTT CATTGCAAAA CTTGA |
| Length | 1955 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 2856146.. 2859081 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G26680.1 |
| Description | DNA repair metallo-beta-lactamase family protein |
| TAIR curator summary | involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage. |
| Alias | [ATSNM1][SNM1][SENSITIVE TO NITROGEN MUSTARD 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 26.5707 |
Ahg332020 | cytochrome P450, family 81, subfamily F, polypeptide 2 |
| 26.8328 |
Ahg477864 | syntaxin of plants 43 |
| 47.7284 |
Ahg483400 | NAC domain containing protein 42 |
| 52.5642 |
Ahg472361 | Protein kinase family protein |
| 52.915 |
Ahg942280 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 63.4429 |
Ahg491260 | UDP-glucosyltransferase 73B2 |
| 66.3928 |
Ahg476076 | NAC-like, activated by AP3/PI |
| 73.3621 |
Ahg489963 | Protein of unknown function (DUF793) |
| 93 |
Ahg916055 | disease resistance protein (TIR-NBS-LRR class) family |
| 94.0638 |
Ahg488124 | WRKY DNA-binding protein 75 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|