Detail


ID : Ahg477864

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477864|fgenesh2_kg.3__565__AT3G05710.2
Sequence
TTGTGAATCT CGGAGCTGTT TTTCTCCGTC GGAGAACTTT GATCCCGCCG GTAATCGGCC GGTTTCCGCC GTCACATTCG TTTGCTTTGT CTATGATGAA ACCGCGATCC TGTTCAGATC TATAGCTTTC GATCGGAAGG GAAGCTAAAA TCTATCTAGA CGCCGAGATC TTGGTTACTT ATCACTGAGA TTCTTCTAGG GTTTATATTT GAGCTGCTAT GGCGACTAGG AATCGTACGC TGTTGTTTAG GAAGTACAGA AGCTCTCTAA GGAGCGTTCG TGCTCCAATG GGGTCGTCTT CGTCGTCGAC GGTAACGGAG CACACTTCGT TGACCGGAGC TAAATCCGGC TTAGGCCCGG TGATCGAGAT GGCGAGCACG TCTCTATTGA ATCCGAATCG GTCTTATGCT CCAGTCAGTA CCGAGGATCC TGGTAATTCG AGTAGAGGTA CAATAACAGT GGGATTACCA CCAGACTGGG TTGATGTATC TGAGGAGATT TCAGTTTACA TTCAACGTGC AAGAACCAAA ATGGCTGAAT TGGGAAAGGC TCATGCGAAA GCGTTGATGC CTTCGTTTGG GGATGGTAAA GAAGATCAAC ATCAAATCGA GTCTTTGACA CAAGAGATCA CCTTCCTATT GAAGAAATCT GAGAAGCAAC TTCAGAGGCT TTCTGCAGCT GGACCTTCTG AAGATTCAAA TGTCAGAAAA AACGTCCAGC GATCTCTTGC TACTGATCTC CAAAACCTTT CTATGGAGCT ACGCAAGAAA CAGTCTACAT ATTTGAAACG TTTGAGACTA CAAAAAGAGG ATGGATCGGA TATAGAGATG AATCTGAACG GAAGCAGCTA TAATGCAGAA GATGATGACT TTGATGATAT GGTATTTAGT GAGCATCAAA TAAGCAAGAT AAAAAAGAGT GAGGAAATAT CAGTAGAGAG GGAGAAAGAG ATTCAACAGG TTGTCGAATC CGTAAGCGAG CTTGCTCAGA TCATGAAGGA TCTTTCCGCG CTTGTGATAG ACCAGGGTAC GATAGTTGAT CGGATTGACT ATAATATCCA GAACGTTGCT AGTACCGTCG ACGATGGTCT CAAACAGCTG CAAAAGGCGG AACGTACACA GAGACAAGGA GGTATGGTGA TGTGTGCATC TGTTCTTGTC ATTCTCTGCT TCATCATGCT GGTACTCTTA ATCCTCAAGG AGATTCTCTT GTGACACAAG GAGATCCCTC ATTATTTTTA TTCTTTTGAA ACAAGAACAC CACATTTTTG CGTTGCGGAG TGTTCTCTAT CCACAAAATG GTCCGAAGAG AAAAACGAAC TGTGTTGTCT ATCTGGCTCG CTGGCTTTTT TTTTTTTTAC TTCTTATGGC GTTTACATAG GAGAACATTA TCACTTTTGT ATTGAATGTT TGTAACTTGG CTTCTTACGA GTTTATAATG ATTTATTTAC ATGTAAAGAA ATTAACCATG ATTTTAAGAA TCTATGGAGA AGAGATCAGA TAGAACTGTA AAGTTTGTTC C
Length1521
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2102730.. 2105200
Download Sequence
A.thaliana
AGI-codeAT3G05710.2
Descriptionsyntaxin of plants 43
TAIR curator summarymember of SYP4 Gene Family
Alias[ATSYP43][SYP43][syntaxin of plants 43]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg474620 RNI-like superfamily protein
13.6015 Ahg927143 Pentatricopeptide repeat (PPR) superfamily protein
13.6748 Ahg357183
22.4499 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
26.8328 Ahg484438 DNA repair metallo-beta-lactamase family protein
31.607 Ahg943233 Ubiquitin-like superfamily protein
39.5221 Ahg474126 Xanthine/uracil permease family protein
41.328 Ahg474798 Peptide chain release factor 2
41.9524 Ahg934793 Yippee family putative zinc-binding protein
42.7083 Ahg482122 cofactor of nitrate reductase and xanthine dehydrogenase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression