Detail



ID : Ahg484511

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484511|fgenesh2_kg.5__503__AT3G27290.1
Sequence
ATAGTTAGAC ACGCGCCAAA TTCGCAACAG AGAAAAAAAG CCCTAAAAAA ATCTCTGATT CCATCTTCTT CTTCCTCTCG AATCCTTTCT CTTTCCTATT TTTTATTTTC CCGCTGATTT CGCGATCCCA TTCGTTCTCA TTCATTCATT CATTCTCTCG CCGTTTTTTT TTTAATCTAT TTCAGATTTC AGTTTCTTTT TTTCTCAGCT TAATTCGTTA ATGGAGGTTA ATTCCGACGA GCTTCGAGGT TCTTATGCTT CTTGTGGTAT CGATTACCGA AAAGTAGAAT TGGGTTTTTG TGAATTTGGG GATGATTTTG TGGGTTTGCC TGATGATCCT TTTTGTATGA ACATTAGATC CACTTTGAAT ACAATCTCTG ATTGGTTTCA TGAGAATCAG ATGTTGCAAC ACCAAATCAC TTTGCCTGAG GATCCATTTT GTATGAAAGT TAGATCGACT TTGAACACAA TCTCGGATTG GTTTCATGAG AATCACAAAG ATTTAGTAAC TGAACAATTT AGCTTAAGTT GGTTTGATCT TGATGATGTT TTTGATGATG ATGATGATGA TGATGATGAT GATGATGCTG GTGAAGCTCA TGACGCGTTT GAGTTAGTTC TGTCATATCT AGAGGTGAAA GAGATTCTTG CGGTTGAAGG AGTTTGCAGG TCTTTGCGTG ATTCGGTTAG AAAGGAGCCT TTCTTCTGGA GAACCATTGA TCTTAATGAC TCTTTTCTTC AATATAGAGT AACTGATGAG TCTCTTTTGA AGTTAACACG CCGCGCTCAA GGTGATGTTC GATGTTTGAA TCTTGGAGGA TGTGTTGGTA TCACTGATTA TGGCTTGAAG CAAGTGCTTG CAATCAATCC ACATCTCACT AAGCTGAGTG TATCTGGTTG TCTTAGACTA AGCACAGCAG GACTACTGTC AACTCTAAGG GACTTAAAAT CCTCAAATCG TCTTGGAGTC AAAAGCCTAA TCACTGGTGG GGCGTTATAT TTCACAAAGG AGCAATTTAA AGAGCTCAAC TTATTACTGG GAGGAGATGC TAAAGCGGGT CCAAAATCGA GGAAGAAGAG ATTCTATACG TCTTGTAGAT CAGAGTTTTC TTTAGAGGAT GATCGAGTTA CTGACCTAGA GATATGCCCG TGGTGTGAGA AACCAAGTCT TGTATTTGAT TGTCCAGCAG AAACCTGTCC GTTGAAGGGT CAATATCCTT ATCCTAAATC ATCGTGCAGA GCTTGCGTAG TCTGCATAGA ACGTTGCCAC GAGTGTGGGA GTTGCTTAAA CGACTGTGAA AACAAGCCGT TCTGTTTTGC ATTCAGCTGT GTGGTCTGCA TTGAGAAGAG GTCTAACCAG TTATAAGAGT TTATTTGAAG TCAAAACCGA AGCTAACACA TGAATTTGAT CCTCAAAACA CTGTTTTCAG AAGATGAAGA ATGAAGAGTC TTGATGCTTG AGGTATCAAT CAAAGTCAAT GAGAAGAGCT GCAACAGAAA AGGAAACATG ATAAGACTCA GAAGGGTGTT TAGTCTTCAT CTACTGCATC ATGAAAGATC TGCGCCAACT AGATTCTGCA AGGGCGCGGA GAGAGAAAGA GAAGCAAAGA CTAGAGCTTT ACTTGAAAGT TGAAGCAGCA GGATTCAAAT GGGAAATAAG TAGAACTTAC AGGAAAAGAG AAGAGATATT TTACATTATC ATTTAATTAG TCTTCTAATC TCCTCCTTAT ATAGCTTTAT GTTAAATGAC TTGTTTAATT TTCAAAATGG ATCAAT 
Length1776
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3379527.. 3381536
Download Sequence
A.thaliana
AGI-codeAT3G27290.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
33.1964 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
48.3529 Ahg483415 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
56.3205 Ahg493948 Pentatricopeptide repeat (PPR) superfamily protein
60.349 Ahg491275
70.5266 Ahg917064 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
81.6823 Ahg943821 beta-galactosidase 14
83.2827 Ahg356828 cold regulated gene 27
90.9285 Ahg922994 related to AP2 1
94.117 Ahg316796 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression