| Annotation |
|---|
| Description | jgi|Araly1|484602|fgenesh2_kg.5__594__AT3G28180.1 |
| Sequence |
AGTTGGTTCA CTTGAGCACA TGATCCTCGT CTCTCTTTTT TTCTCTCTCT CTCTCAATCA CAAGTTTCAG TTACAAGCTG AACCAAAGTA TCTCAGATTC TGATCTGATT ACTGTTTTGT CTGTGAAACA AAAACAAACG ATCCTGTTTT TATGGAAAAT TTAATGAAAC AGTGACGACT CAAATCCTCA TCTTTATAAT GACAAACATT TCATAGTACC AATCTCTCTT TCTTTGTCAT TCATGGCTCC AAATTCAGTA GCAGTGACAA TGGAGAAGCC AGACAACTTC TCTTTACTAG AAATCAACGG TTCAGATCCA TCCGCATTCC CCGACAAGCG TAAATCCATC AGTCCAAAGC AATTCTCATG GTTCCTCCTT CTCAAAGCTC ATAGAGTCGT CTCGTGTCTC TCGTGGCTCG TATCTTCGGT TAAAAAGCGA ATAGCTTTCT CCGCGAAGAA CATTAACGAA GAAGAAGATC CTAAAAGCAG AGGAAAACAA ATGTACAGAT TCATCAAAGC TTGTCTTGTT ATCTCCATAA TTGCCTTGTC TATAGAAATC GTCGCGCATT ACAAGAAATG GAATCTTGAT CTTATAAACC GACCTTCGTG GGAGGTTTAT GGCCTTGTCG AATGGTCTTA CATGGCTTGG CTTTCGTTTC GATCCGATTA TATTGCTCCT CTTGTCATAA GTCTCTCAAG ATTCTGCACT GTCCTCTTCT TGATCCAGTC TCTTGATCGG TTAGTACTCT GTTTTGGTTG CTTCTGGATC AAATTTAAAA AGATCGAACC TAAGCTCAAA GAAGAATCTA TCGATTTGGA AGATCCCTCC AGTTTCCCAA TGGTCCTTGT TCAGATCCCA ATGTGCAACG AACGAGAGGT ATATGAACAA TCAATAGGAG CAGCATCACA ACTTGATTGG CCAAAAGATA GGATCTTAAT TCAAGTTCTA GACGATTCAG ACGATCCAAA TTTACAACTT TTGATCAAAG AAGAAGTATC GGTTTGGGCC GAAAAAGGCG TAAACATAAT TTATCGGCAT AGGTTGATCA GAACTGGTTA CAAAGCTGGG AATTTGAAAT CAGCCATGAC TTGTGACTAC GTTAAAGATT ACGAGTTCGT TACTATCTTC GACGCAGATT TCACACCAAA TCCTGATTTC CTCAAGAAGA CTGTTCCTCA TTTCAAGGGA AATCCAGAGC TAGGACTGGT CCAAGCAAGG TGGTCATTCG TGAACAAAGA TGAGAATCTC CTCACAAGGC TACAAAACAT AAACTTATGC TTCCACTTCG AAGTAGAACA ACAAGTGAAC GGTGTGTTTC TCAACTTTTT CGGTTTCAAT GGAACCGCTG GAGTCTGGAG AATCAAGGCA TTGGAAGAAT CCGGCGGGTG GCTCGAGAGA ACGACTGTGG AAGATATGGA TATCGCGGTT AGAGCGCATC TTAACGGCTG GAAATTTATT TACCTCAATG ATGTTGAAGT CACTTGTGAG TTGCCTGAGT CTTATGAAGC TTACAAGAAG CAACAACATC GTTGGCATTC GGGTCCTATG CAGCTGTTCC GGTTATGCCT TCCTTCCATA ATCAAATCAA AGATATCGGT TGGGAAGAAG GCGAATTTGA TCTTCCTTTT CTTTCTTCTA AGGAAGCTTA TTCTACCTTT TTACTCATTC ACACTCTTTT GCATCATACT TCCATTGACA ATGTTCATAC CCGAAGCCGA GCTTCCGTTG TGGATCATCT GTTATGTTCC TATCTTCATT TCGCTTCTCA ACATTCTCCC GTCGCCTAAA TCTTTCCCTT TCTTAGTCCC TTACCTCCTT TTCGAAAACA CTATGTCGAT AACCAAGTTC AACGCCATGA TCTCCGGGCT ATTCCAGCTC GGATCGGCTT ACGAGTGGGT TGTGACAAAG AAAACCGGGA GATCATCCGA ATCCGACTTG CTAGCATTTG CTGAAAAGGA AGAGAAGTTG CATAGGAGAA ACTCGGAGTC CGGGTTGGAG CTTCTTAGCA AACTTAAGGA GCAAGAGACC AACCTTTTAG CGCAAGAAAC CGTGAAGAAG AGCCTTGGAG GGCTAATGAG GCCTAAGAAC AAGAAAAAGA CGAACATGGT GTTCAAGAAA GAGCTTGGGC TTGCTTTCTT GCTGCTAACC GCAGCTGCAA GGAGCTTTCT ATCGGCGCAC GGTCTTCACT TCTACTTCTT GCTGTTTCAG GGACTGTCTT TCTTAGTTGT AGGGTTGGAT TTGATCGGAG AACAGATCAG CTAGACTCAC ACTAAATCAA GACAGAGAAC AAGGAAACAA ATACCGTTTA TATTCGCTAT TTTTTATTCT TTTCCCTTTC TTATATGTGG GTTTTATACA TAATTTTCAA GAACTTATAA TGTCCAGTTT CAGATAAATG AATTGAAACG AATTTGTTAT ATG |
| Length | 2423 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 4086053.. 4089577 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G28180.1 |
| Description | Cellulose-synthase-like C4 |
| TAIR curator summary | encodes a gene similar to cellulose synthase |
| Alias | [ATCSLC04][ATCSLC4][CSLC04][CSLC04][CSLC4][Cellulose-synthase-like C4][CELLULOSE-SYNTHASE LIKE C4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg488016 | N-MYC downregulated-like 2 |
| 12.5698 |
Ahg940449 | cellulose synthase 5 |
| 13.3417 |
Ahg497154 | FASCICLIN-like arabinogalactan 2 |
| 20.1494 |
Ahg479639 | O-fucosyltransferase family protein |
| 22 |
Ahg483623 | Integrase-type DNA-binding superfamily protein |
| 22.4499 |
Ahg477494 | Mannose-6-phosphate isomerase, type I |
| 25.4165 |
Ahg479215 | S-adenosylmethionine synthetase family protein |
| 25.4558 |
Ahg901436 | FASCICLIN-like arabinogalactan protein 16 precursor |
| 27.7489 |
Ahg496689 | cellulose synthase 6 |
| 31.749 |
Ahg478515 | FASCICLIN-like arabinogalactan protein 18 precursor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|