Detail



ID : Ahg488016

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488016|fgenesh2_kg.6__1150__AT5G11790.1
Sequence
AAACACAAAA AAACGAAGAT AGCCATCGTT ACGGTGAGAG AAGAGAGCAG AGAGAAGGCC ATGGAAAGAT AATACTCTGC TTTTTTTAAG GAGATGGCGG ATTCAAGCGA TTCTGTCTCC ATTGATATGG AGGCATTGTC TCTTGGAGGA CAGGAACACC TTGTGGAGAC TACTTATGGC CCGGTTTGTG TTGTCGTTTG TGGAGATCCA GATAAACCAG CTCTTATCAC ATATCCTGAT ATTGCTCTAA ATTATATGTT CTGTTTTCAA GGATTATTGT TTTGTCCAGA AGCTAGTTCT TTGTTACTCC ACAACTTTTG CATATATCAC ATCAGTCCTC TTGGCCATGA GTTGGGAGCT CCAATGATCA GTGTTGATGC TCCTTTGCTC TCTGCTGATG ACTTAGCGGA CCAGATAGTT GAGGTTCTTA ATTTTTTCGG ACTTGGTGCA GTAATGTGTA TGGGTGTCAC AGCAGGAGCC TACATTCTGA CCTTATTTGC TATGAAGTAC AGGCAAAGAG TTCTGGGCTT AATACTCGTC TCTCCCCTGT GCCAAGCGCC TTCTTGGTCA GAATGGTTGT GCAATAAGGT TATGTCTAAT TTACTTTACT ACTATGGTAC GTGTGGAGTG GTTAAGGAAC TGTTACTAAA ACGGTACTTC AGCAAGGAAG TTCGTGGTAA TGGTCAAGTT CCAGAATCAG ATATCGTTCA AGAATGCAGA AGATTACTTA GTGAGCGGCA AAGTACAAAT GTATGGAGAT TCCTTGAGGC AATCAATGGG AGAGTGGATC TTAGTGAAGG ATTAAGGAAA TTGCAATGCA GAACTCTAAT ATTCATTGGT GAAAATTCTG CCTACCACTC CGAGGCCGTT CACATGACCA CCAAACTAGA CAGACGATAT GGCGCATTAG TCGAGGTGCA GGGTAGCGGG TCGTTGGTGA GTGAAGAACA GCCACAGGCG ATGGTAATAC CAATGGAATA CTTTTTGATG GGATATGGCT TGTATCGTCC AACACAGAGC GTAAGCCCGA GAAGTCCTTT GAGCCCAACC CGAATCTCTC CGGAGCTTCT ATCCCCTGAA AACATGGGTT TGAAACTCAA GCCGATTAAG ACACGACTCG CCCTATAGCC CTGCCTCCTC TGCTACAGAC ATTTACATAT ACACAACATG TGAATCATAC ACCACATAAA AATCGCCATT GCTGGAGTTG GAGCTGTTCC TCTGTTATGA TTTGAGCTGT AGATATAGAC AGAGATATAT TGATCATCTA TATATAGAGA GAGAGAGGGA GATGAAGAAG AGTAAAAAAA AAGGATGGGG GAGGGATTGA TTTATGGTAG 
Length1340
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4601349.. 4604641
Download Sequence
A.thaliana
AGI-codeAT5G11790.1
DescriptionN-MYC downregulated-like 2
TAIR curator summary
Alias[NDL2][N-MYC downregulated-like 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg490316 UDP-xylosyltransferase 2
6.32456 Ahg484602 Cellulose-synthase-like C4
7.61577 Ahg477829 Major facilitator superfamily protein
10.583 Ahg496689 cellulose synthase 6
14.4914 Ahg901436 FASCICLIN-like arabinogalactan protein 16 precursor
14.6969 Ahg493825
14.8324 Ahg483403 conserved peptide upstream open reading frame 17
18 Ahg357447 BCL-2-associated athanogene 1
18.3303 Ahg328029 cytochrome P450, family 81, subfamily F, polypeptide 3
22.9783 Ahg915315 nudix hydrolase homolog 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression