Detail


ID : Ahg484639

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484639|fgenesh2_kg.5__631__AT3G28660.1
Sequence
ACGTCAACAA CGAGGATGAG TGTTCTCTCA AGCTTCCATA AATCATGGAA GAGTTTAATC CTCGCAAGTC AACGTTGCAA CACAGTGAAC CAAATCAAAT CAACACATTC TCTATTCATC ATCCATGGCC TCCATCGAAA CACTTACGCA ATTAGCAAAC TTCTCACAGC TTTTCTCCTT CTTCCCAATC TAAACAAACA CTTTCACTAC GCTTCCACTA TATTCGATTC GATTCAGATT CGTAATTCAT TCGTTTACGA TACTATGATA AGAATCTGCT CACGAAGTTC TCTTCCTCAC TTGGGTTTAC GATATTTTCG ATTAATGGTG AAGGAAGAAG ATATAGCTCC AAGTTATCTC ACGTTTTATT TCTTGATTGT TGCTTGTTTT AAAGCTTGTT TATTCTCTGT GGGTAAGCAA ATTCATTGTT GGGTGGTTAA AAATGGTGTC TTTTTATCGG ATGGTCATGT ACAGACTGGA ATTTTACGGA TTTATGTGGA AGATAAAGTT TTGTTAGATG CCCGCAAAGT GTTCGATGAA ATTCCGCAAC CAGATGTTGT GAAATGGGAT GTTTTGATGA ATGGATATGT TAGATGTGGT TTAGGTTCTG AGGGTTTAGA GGTGTTTAGG GAGATGTTGG TACGAGGAGT AGAGCCTGAT GAGTTTTCGG TTACTACGGC GTTAACGGCT TTTGCACAAG TTGGGGCTTT AGCTCAAGGG AAGTGGATTC ATGAGTTTGT GAAGAAGAAG AGATGGATTG AGTCTGATGT GTTTGTAGGA ACGGCATTGG TTGACATGTA TGCTAAGTGT GGTTGCATTG AGATGGCTGT GGAAGTTTTC GAAAAGTTGA GTAGGAGGAA TGTTTTCTCA TGGGCAGCTT TAATTGGAGG ATATGCGGCT TATGGTTATG CAAAGAAAGC TATGACGTGT TTGGACCGGA TGGAGCGAGA AGATGGTATT AAGCCTGACA GTGTAGTTCT TCTTGGGGTC TTAGCTGCTT GTGCTCATGG GGGATTTCTT CAAGAAGGCA GAGCAATGTT AGGAAATATG GAAGCTCGAT ACGGAATTAC TCCAAAGCAT GAGCATTACA GCTGTATAGT AGATTTGATG TGCAGAGCTG GAAGATTAGA TGATGCACTT GATCTTATCG AAAAAATGCC CATGAAACCT CTTGCATCTG TTTGGGGTGC CTTACTAAAT GGTTGTCGAA CGCACAAGAA TGTTGAACTC GGAGAACTAG CTGTTAAAAA TCTTCTTGAC TTGGAGAAAG GAAATGCAGA GGAAGAGGAA GCAGCTCTTG TTCAACTATC TAATATATAC TTTAGTGTTC AACGAAATCC CGAGGCATCT AAAGTTCGTG GAATGATAGA GCAGAGGGGG ATAAGAAAGA CACCAGGATG GAGTGTGTTA GAGGTGGATG GAAAGGTTAC CAAATTTGTT TCGGGAGATG TGTCTCACCC AAATCTGCTA CAAATTCACA CAGTGATTCA TCTGCTATCT GTTGATGCCT TGCAGATTTT GTAACACTCA TTTCTTGAGT TCTCTCGTTT CTACAGACAA CAGGAGCTTC TGGACA
Length1576
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4500154.. 4501850
Download Sequence
A.thaliana
AGI-codeAT3G28640.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.784 Ahg485058 Pentatricopeptide repeat (PPR) superfamily protein
16.3095 Ahg345509 GRAS family transcription factor
16.9706 Ahg478011 Tetratricopeptide repeat (TPR)-like superfamily protein
32.0312 Ahg931103 Pentatricopeptide repeat (PPR) superfamily protein
33.7639 Ahg489839 methyl esterase 12
36.8782 Ahg479395 Tetratricopeptide repeat (TPR)-like superfamily protein
39.1152 Ahg482514 basic pentacysteine 7
47.0744 Ahg949231 B-box type zinc finger protein with CCT domain
49.96 Ahg492087 Ypt/Rab-GAP domain of gyp1p superfamily protein
59.8999 Ahg902925 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression